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Name : clpC (ML0235) Accession : NP_301295.1 Strain : Mycobacterium leprae TN Genome accession: NC_002677 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 306003 - 308549 bp Length : 2547 bp Strand : + Note : - DNA sequence : ATGTTCGAAAGATTTACCGATCGTGCCCGCAGGGTGGTCGTCCTGGCACAGGAAGAGGCCCGGATGCTCAACCATAACTA CATCGGCACCGAGCACATTTTGCTGGGTCTTATCCACGAAGGCGAAGGTGTCGCGGCGAAATCGTTGGATTCGTTGGGGA TTTCACTTGAAGCCGTTCGCAGTCAGGTCGAAGATATTATCGGCCAGGGTCAGCAGGCGCCGTCGGGGCATATCCCGTTT ACGCCTCGTGCCAAGAAGGTTCTTGAGCTGAGCTTGCGTGAGGCGCTGCAGCTCGGCCATAATTACATCGGCACCGAGCA CATTTTGCTGGGCCTTATCCGGGAGGGAGAGGGTGTGGCCGCCCAGGTGCTGGTCAAGTTGGGCGCCGAGCTGACCCGAG TGCGCCAGCAGGTGATCCAGCTGCTAAGTGGCTACCAGGGCAAAGAAGCTGCTGAAGCGGGCACTGGAGGCCGGGGTGGC GAATCCGGTAGTCCATCTACATCTCTGGTGCTCGACCAGTTCGGTCGAAACCTGACGGCTGCTGCGATGGAGAGCAAGCT GGATCCGGTCATTGGCCGCGAAAAGGAAATCGAGCGGGTGATGCAGGTGCTGAGCCGGCGCACCAAGAACAACCCGGTGT TGATCGGCGAGCCTGGCGTCGGCAAGACCGCTGTCGTCGAGGGTCTTGCGCAGGCCATCGTGCACGGTGAGGTTCCCGAG ACGCTGAAAGACAAGCAGCTTTACACACTTGACCTGGGCTCGTTGGTAGCCGGCTCGCGCTACCGCGGTGACTTCGAGGA GCGCCTGAAGAAGGTACTCAAGGAGATCAACACCCGCGGTGACATAATCTTGTTCATCGATGAGCTGCACACCCTGGTAG GTGCCGGTGCCGCCGAGGGGGCGATCGATGCCGCGTCGATCCTCAAGCCCAAGCTGGCCCGCGGTGAGCTGCAAACCATT GGCGCTACCACCCTCGACGAATATCGCAAGTACATCGAGAAAGACGCCGCCCTGGAGCGCCGCTTCCAGCCGGTGCAGGT GGGTGAGCCAACGGTGGAGCACACTATCGAGATTCTCAAGGGCCTGCGGGACCGCTACGAGGCCCACCATCGGGTGTCGA TCACCGACTCGGCGATGGTGGCCGCCGCCACTCTGGCCGATCGCTACATCAATGACCGATTCCTCCCGGACAAGGCGATC GACCTGATTGACGAAGCAGGCGCCCGGATGCGGATTCGCCGAATGACCGCGCCACCAGATCTGCGTGAGTTCGACGAGAA GATCGCCGAAGCCCGCCGGGAGAAAGAGTCGGCGATCGACGCCCAGGATTTCGAGAAGGCGGCTAGCCTACGCGACCGGG AGAAGCAACTGGTAGCTCAGCGTGCAGAACGCGAAAAGCAATGGCGTTCAGGCGATCTCGATGTTATTGCGGAAGTTGAC GACGAGCAAATTGCCGAGGTGCTGGGCAACTGGACCGGTATACCGGTGTTCAAGCTCACCGAGGCTGAGACTACCCGGCT GCTCCGTATGGAGGAGGAGCTGCACAAACGGATTATCGGCCAGGAGGATGCTGTTAAGGCCGTGTCCAAGGCGATCCGTC GTACCCGCGCCGGGCTAAAAGACCCCAAGCGCCCGTCGGGTTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACT GAACTGTCTAAGGCGCTGGCCAACTTTTTGTTTGGCGACGACGACGCGCTCATCCAGATCGATATGGGCGAGTTCCACGA CCGGTTCACCGCGTCGCGGCTTTTTGGTGCTCCGCCGGGATACGTCGGCTACGAGGAGGGCGGTCAGCTCACCGAGAAGG TGCGGCGCAAGCCGTTCTCGGTGGTGCTGTTCGACGAGATCGAAAAAGCGCATCAGGAGATCTATAACAGCCTGTTGCAG GTGCTTGAAGACGGGCGGCTCACCGATGGGCAGGGTCGCACGGTGGACTTCAAAAACACCGTGCTGATCTTTACATCCAA CCTTGGTACCTCCGACATCTCCAAGCCGGTCGGTCTGGGCTTCACCCAAGGTAGTGGTGAGAACGACTACGAGCGGATGA AGCAGAAGGTCAACGATGAGCTGAAGAAGCACTTCCGCCCAGAGTTCCTCAACCGCATCGACGACATCATCGTCTTCCAC CAACTGAGCCGTGATGAGATCATCCGGATGGTCGATCTCATGATTAGCCGGGTTGCTAACCAGCTCAAGGTCAAAGACAT GACGCTGGAGTTGACAAACAAGGCTAAGGCCTTGTTGGCTAAGCGTGGCTTCGATCCGGTGCTGGGTGCTCGCCCGCTGC GGCGTACTATCCAACGCGAGATCGAGGACCAGCTCTCGGAGAAGATCCTCTTCGAGGAAGTCGGGCCGGGACAGGTCGTC ACCGTCGACGTCGACAACTGGGATGGCGAAGGCCCCGGTGAGGACGTGAAGTTCACTTTCACTGGGATCCGCAAGCCGTC GACAGAGCCGGATCTGGCTAAGGCCGGAGTGCACAGCGCTGGCGGGCCTGAGCCGGTCGAGCAGTAG Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLDSLGISLEAVRSQVEDIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGG ESGSPSTSLVLDQFGRNLTAAAMESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI GATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAI DLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKQLVAQRAEREKQWRSGDLDVIAEVD DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT ELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGFTQGSGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH QLSRDEIIRMVDLMISRVANQLKVKDMTLELTNKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVV TVDVDNWDGEGPGEDVKFTFTGIRKPSTEPDLAKAGVHSAGGPEPVEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 81 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | NP_301295.1 | ATP-dependent Clp protease | VFG0079 | Protein | 0.0 | 60 |
| clpC | NP_301295.1 | ATP-dependent Clp protease | VFG0080 | Protein | 3e-144 | 51 |
