|
Name : recG (PM0919) Accession : NP_245856.1 Strain : Pasteurella multocida Pm70 Genome accession: NC_002663 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1083539 - 1085620 bp Length : 2082 bp Strand : - Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGACCATACAATTCCTCGATGCAGTCCCTTTAACGACACTTTCTGGTGTTGGGGCTGCCATTTCTGACAAGCTTGGGCG GATTGGTATTCACAATCTCCAAGATTTGTTATTTCATTTACCGATTCGTTATGAAGATCGTACTCGAATTACGCCAATTC ATGATCTTCGTCCTGATGCTTATGCTACCATTGAGGGGCTTGTACAAACGTGTGAAGTGCAGTTTGGTAAACGCCCAATT TTAAATGTTTCTCTTTCGGATGGCACATCAAAAATTATGCTACGTTTTTTTAACTTCAATGCAGGCATGAAAAATAGTCT TCAACCGGGTGCAAGAGTAAAAGCCTTTGGTGAGGTTAAACGTGGGCGTTTCATGGCAGAAATTCATCACCCGGAATATC AAATTATTCGCGATAATGCCCCTTTAATTTTAGAAGAGACCTTGACGCCAATTTATTCTACAACAGAGGGAATAAAACAA AATTCATTACGTAAGCTGACTGATCAAGCTTTGGCTGTGCTTGAGAATATCCAAATTGCAGAAATCTTACCTAATGAATT TAATCCACATCCTTTTAGCTTAAAAGAGGCGATTCGTTTTTTGCATCGCCCACCGCCTGATGTATCCTTAGAAGCCTTAG AAAAAGGAACCCACCCCGCTCAGCAACGCCTGATTTTTGAGGAATTATTGGCGCATAATTTGGCGATGCAAAAAGTGCGG ATCGGTACACAGCAATTTTCCGCTTACCCTTTATCTTATCAGACTGATTTAAAACAGCGTTTTTTGGCACAATTACCTTT TACACCAACAGATGCACAAGTTCGTGTTACCCAAGAGATAGAGCAAGATCTTACTCATCCTTTCCCGATGATGCGTTTAG TTCAAGGTGATGTTGGCTCAGGTAAAACCTTGGTGGCTGCGTTAGCTGCCTTACTTGCAATAGATAATGGCAAACAAGTC GCGCTCATGGCACCTACCGAAATTTTAGCGGAACAACATGCTACAAATTTTCGCCGTTGGTTTGAGTCCCTAGGCATTGA AGTGGGTTGGCTTGCAGGTAAAGTCAAAGGAAAGGCGCGTCAAACAGAACTGGAAAAGATTCGAACGGGGCAAGTACAAA TGGTCGTGGGAACCCATGCCTTATTTCAAGACGAGGTGGAATTTTCAGATTTGGCATTGGTGATCGTTGATGAACAGCAT CGGTTTGGTGTGCATCAGCGTTTAATGCTACGAGAAAAAGGTAAACAGGCTGATCATTATCCGCACCAACTCATTATGAC GGCGACACCGATTCCTCGCACTTTAGCCATGACGGTGTATGCGGATTTAGATACCTCGATTATTGATGAACTACCGCCAG GACGAACACCGATTACGACCGTGGCAATTTCTGAAGAAAGACGAGCTGAAGTCATTGCTAGAGTGAATCATGCCTGTGTG AATGAAAAACGTCAGGCATATTGGGTCTGTACATTGATTGATGAATCAGAAGTACTAGAGGCACAAGCGGCTGAGGCTAT TGCTGAAGATCTTCGTAAAATTCTACCGCACTTACGCATTGGCTTAGTGCATGGTCGTATGAAACCGGCTGAAAAACAAG ACATCATGCAAGCATTTAAACAGGCAGAAATTGATTTGTTAGTCGCAACAACGGTGATTGAGGTCGGTGTTGATGTGCCG AATGCCAGCTTAATGATCATTGAAAATGCAGAACGTTTAGGTTTATCACAATTACATCAGTTACGCGGTCGAGTAGGACG AGGGACAACCGCTTCTTTTTGTGTACTGATGTATAAGCCCCCACTAGGAAAAATTTCCCAGAAACGTTTACAAGTCCTCA GAGATACGCAAGATGGTTTTGTTATTTCGGAAAAAGATTTAGAAATCAGAGGACCTGGCGAAGTGCTTGGTACAAAACAA ACCGGGGTGGCCGAATTTAAGGTGGCAAATTTAATGCGCGATCGCAAAATGATTCCTACGGTGCAGTATTATGCGCGTCG TTTGATTGTTGAGCAACCAGAAGTGGCCACCAAATTAATCCAACGTTGGATTAATCAACGGGAGATTTATACGCATGTCT AA Protein sequence : MTIQFLDAVPLTTLSGVGAAISDKLGRIGIHNLQDLLFHLPIRYEDRTRITPIHDLRPDAYATIEGLVQTCEVQFGKRPI LNVSLSDGTSKIMLRFFNFNAGMKNSLQPGARVKAFGEVKRGRFMAEIHHPEYQIIRDNAPLILEETLTPIYSTTEGIKQ NSLRKLTDQALAVLENIQIAEILPNEFNPHPFSLKEAIRFLHRPPPDVSLEALEKGTHPAQQRLIFEELLAHNLAMQKVR IGTQQFSAYPLSYQTDLKQRFLAQLPFTPTDAQVRVTQEIEQDLTHPFPMMRLVQGDVGSGKTLVAALAALLAIDNGKQV ALMAPTEILAEQHATNFRRWFESLGIEVGWLAGKVKGKARQTELEKIRTGQVQMVVGTHALFQDEVEFSDLALVIVDEQH RFGVHQRLMLREKGKQADHYPHQLIMTATPIPRTLAMTVYADLDTSIIDELPPGRTPITTVAISEERRAEVIARVNHACV NEKRQAYWVCTLIDESEVLEAQAAEAIAEDLRKILPHLRIGLVHGRMKPAEKQDIMQAFKQAEIDLLVATTVIEVGVDVP NASLMIIENAERLGLSQLHQLRGRVGRGTTASFCVLMYKPPLGKISQKRLQVLRDTQDGFVISEKDLEIRGPGEVLGTKQ TGVAEFKVANLMRDRKMIPTVQYYARRLIVEQPEVATKLIQRWINQREIYTHV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 9e-104 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| recG | NP_245856.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 0.0 | 59 |
