|
Name : hexC (PM0779) Accession : NP_245716.1 Strain : Pasteurella multocida Pm70 Genome accession: NC_002663 Putative virulence/resistance : Virulence Product : protein HexC Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3524 EC number : - Position : 923293 - 924429 bp Length : 1137 bp Strand : + Note : - DNA sequence : ATGATCGAAACAAAAATGCAAAAAAATCAATTTAAAAAATGGTCCCGAAAATTTCGAAAAATAAGTACACTCTTTAAATA CATGGTAATACTTCCAACATGTTGCTCACTCTTTTATTTTAGTTTATGGGCCTCTGATATTTATATTTCTCAATCGAGCT TTGTTGTGCGCACGCCAAAAAATCAAGCCGCATTAAGTGGTGTCGGAGCCCTCTTACAAAGCTCTGGCTTTGCTCGCGCA CAAGATGATACTTATACTGTACAAGAATTCATGCGTTCACGTTCTACGCTAGAATTATTAGAAAAAAGTATCCCTATCCG CCAGTTTTATGAGGATAAAGGTGATTTATTTAGCCGCTTTAATCCTCTAAATATTTTCTCGGAACAAGAAGCGTTTTATC AATACTTTAGTAAAAAGCTTTCTGTTAATTTTGATTCAGTATCAGGCATTGCTACGCTCAATATCCGGGCATTCGATCCG AAAGAAGCACAACAAATTAACCAAGAATTGTTAAAACAAGGTGAATATCTTATCAATCGCCTCAATGAGCGTGCGCGAAA AGATACGGTTATGTTTGCTGAACTTGCAGTCAGTGAAGCAGAAAAAAAAGTGACAGAAACTTCTTCTGCATTAAGTGAAT ACCGTATTAAAAATGGGGTATTCGATTTACAGTCTCAATCAGAAGTGCAATTGTCTTTAATTTCGACATTGCAAAATGAG CTCATTACGATTCAAACACAATTAGACCAAGTACGTTCTATTTCACCAAATAACCCTCAAGTGCAAACATTACTTGCGCG AGCAAACAGTATCCGTAAAGAAATGCAACAACAAGTACAGCAAGTGTTAGGTGGAGGAAATTCAATTGTGACACAAACTG CAGAATATCAACGTTTAGTACTGAATAATACGCTCGCTCAGCAGCAGCTAGGTACTGCAATAACGTCATTACAGAATGCC AGATCAGAGGCAGATCGCCAACAGTTGTATTTAGAAATCATTAGTTATCCTAATGAACCCGATTTGGCCTTAGAACCTTA CCGTTTATACAATATTCTTGCTACGTTATTTATTTCTTTAATTTTATATGGCATTACTCTTCTCTTATTAGCCAGCATTC GAGAGCATAAAAATTAA Protein sequence : MIETKMQKNQFKKWSRKFRKISTLFKYMVILPTCCSLFYFSLWASDIYISQSSFVVRTPKNQAALSGVGALLQSSGFARA QDDTYTVQEFMRSRSTLELLEKSIPIRQFYEDKGDLFSRFNPLNIFSEQEAFYQYFSKKLSVNFDSVSGIATLNIRAFDP KEAQQINQELLKQGEYLINRLNERARKDTVMFAELAVSEAEKKVTETSSALSEYRIKNGVFDLQSQSEVQLSLISTLQNE LITIQTQLDQVRSISPNNPQVQTLLARANSIRKEMQQQVQQVLGGGNSIVTQTAEYQRLVLNNTLAQQQLGTAITSLQNA RSEADRQQLYLEIISYPNEPDLALEPYRLYNILATLFISLILYGITLLLLASIREHKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ctrB | NP_273136.1 | capsule polysaccharide export inner-membrane protein | Not tested | IHT-A | Protein | 5e-93 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hexC | NP_245716.1 | protein HexC | VFG0686 | Protein | 8e-98 | 64 |
| hexC | NP_245716.1 | protein HexC | VFG0698 | Protein | 8e-98 | 64 |
| hexC | NP_245716.1 | protein HexC | VFG0256 | Protein | 2e-93 | 61 |
