Gene Information

Name : phyA (PM0773)
Accession : NP_245710.1
Strain : Pasteurella multocida Pm70
Genome accession: NC_002663
Putative virulence/resistance : Virulence
Product : protein PhyA
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3563
EC number : -
Position : 912201 - 914291 bp
Length : 2091 bp
Strand : -
Note : -

DNA sequence :
ATGTCAATTTTATATGACTATATTAGATTAAATATGTATCAAGAGTTTCTTATTTTTTCTAAAGGGATGTTAAAAATTCC
TTATTTAAGCGGTTTTTTTACCCAACGCTTGAAAATGTTCTCTCCATTTGTCACATGGAAAAAGGAGAGAACATGTATTT
TAGAATGGGGATATAAAGCATCATCAAAGAAAGCGAGGCATTTTGCACAACAACATGATTTACCTTATGCGACGATAGAA
GATGGTTTTTTACGTTCTATTGGACTGGGTGTGGATGGGTATCCACCTTTCTCATTAGTGTACGATGATATTGGTATTTA
TTATGATATCAATCAGCCTTCTCGTTTAGAAAACTTAATTCTTTCTCAAGATGTATTACTTCAGGAAAAAGTCGATCAAG
TTGAATATGCAATTGAATTAATTTGTACACATAACCTTTCCAAATATAACCACGCTATTGATACACCTTTACAGAATACG
AAGAGGCCGATTGTCTTAGTCGTTGATCAAACATATGGCGATATGGCAGTTACTTTCGGGAATGCCGAGCAGAGTGATTT
TCTACATATGTTAGAACGTGCGATTATTGAAAATCCAACAGCAGAAATCTGGTTAAAAACCCATCCTGATGTAATGTGTG
GTAAAAAACAAGGCTATTTAACGGAATATCAGCAATTTCCAAGAGTAAAAGTATTATCAGAAGATTTTAATTCTATCTCA
CTACTAAAGCATGTTGATAAAGTTTATTGCGTGACATCTCACACTGGGTTTGAGGCCCTTTTGTTAGGAAAAACTGTCGT
GACTTTTGGGGCTGCCTGGTTTTCTGGTTGGGGATTGACGGATGATCGGCATGCGTATATTCGTCAGCTAAAACAGAGTA
AGAGAAGAGCGAAGCGTTCATTGTTGCAGTTATTCTATGCTGCTTATTTCCAATATTGTCGTTATATTAATCCTAATACG
GGTAAATCAGGCACATTGTTTGATGTCATTGATTATCTGATTCAAGCAAAAAAAGTAACCAATCAGTTAGCTGGTGATAT
TTATTGTGTGGGTATGCGCTTTTGGAAACGTAAAGTGGTTCAACCCTTTTTTCAATTTCCACGCTGTCGTTTACATTTTG
TGCTGAATGTGCATGAGCTAAAGCGATGTATTCACGAGAAATCTCAGGCTAAAATAGTGGTGTGGGGACATTCACACATT
GAAGTGGTTGAATATGCCAAGCAACAGCAACTTCCTCTTTTGAGAATGGAAGATGGTTTTTTACGTTCAGTTGGGTTAGG
GTCTAATTTAACGCCACCGATATCATTAGTTTTAGATGACGTTGGCATTTATTTTGACGCCCAATCTCGTTCCCGATTAG
AGGATATTCTACAGCATCAATCCTTTACTCTAAAGGATTTACAGCGCGCAGAAACGTTAAAGAAAACACTGATTGAGCAA
CATATTGGTAAGTATAATGTGGGACATACACACTTATGCCTAACACACATCAGACAAAATAAACTTTTAGTTGTGGGACA
AGTGGAAAATGATGCTTCAATTCAATATGGTTCACCGCATATTCGTACGAATGCAGAGTTATTATGTACGGTCAGAAAAA
ATAATCCCCAAGCCTATATTATTTATAAACCTCATCCTGATGTGGTTGCAGGCAATCGTAAAAACACAGATCGTCTAGAT
GATTATCGACAGTATGCTGATTTCGTGGTTGAGAAAGCCAATATATTGGATTGCATTAACCAAGTGGATGAAGTGCATAC
GATGACCTCTTTAGCGGGGTTTGAAGCGTTACTGCGCGAGAAAAAAGTACATTGTTATGGCTTGCCTTTTTATTCTAACT
GGGGGCTAACAGTGGATCATCTTTCTCTAAACCGAAGAAGTCGGAAGTTAAGTCTTTTAGAATTAATTGCTGGCGTGCTG
ATTTATTACCCACAATATATTGACCCAAAAACAAAAACAATGATCGATGTGCAGCGAGCGGTTGATATTCTGATCGAGCA
ACGTCGAAAAATAAAAAATAATAAATTACATACAAATTATTTTATGAACATTTTTATGAAATTAAAAAATGTTTATTCTG
TTTTGAGGTAG

Protein sequence :
MSILYDYIRLNMYQEFLIFSKGMLKIPYLSGFFTQRLKMFSPFVTWKKERTCILEWGYKASSKKARHFAQQHDLPYATIE
DGFLRSIGLGVDGYPPFSLVYDDIGIYYDINQPSRLENLILSQDVLLQEKVDQVEYAIELICTHNLSKYNHAIDTPLQNT
KRPIVLVVDQTYGDMAVTFGNAEQSDFLHMLERAIIENPTAEIWLKTHPDVMCGKKQGYLTEYQQFPRVKVLSEDFNSIS
LLKHVDKVYCVTSHTGFEALLLGKTVVTFGAAWFSGWGLTDDRHAYIRQLKQSKRRAKRSLLQLFYAAYFQYCRYINPNT
GKSGTLFDVIDYLIQAKKVTNQLAGDIYCVGMRFWKRKVVQPFFQFPRCRLHFVLNVHELKRCIHEKSQAKIVVWGHSHI
EVVEYAKQQQLPLLRMEDGFLRSVGLGSNLTPPISLVLDDVGIYFDAQSRSRLEDILQHQSFTLKDLQRAETLKKTLIEQ
HIGKYNVGHTHLCLTHIRQNKLLVVGQVENDASIQYGSPHIRTNAELLCTVRKNNPQAYIIYKPHPDVVAGNRKNTDRLD
DYRQYADFVVEKANILDCINQVDEVHTMTSLAGFEALLREKKVHCYGLPFYSNWGLTVDHLSLNRRSRKLSLLELIAGVL
IYYPQYIDPKTKTMIDVQRAVDILIEQRRKIKNNKLHTNYFMNIFMKLKNVYSVLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lipA NP_273145.1 capsule polysaccharide modification protein Not tested IHT-A Protein 1e-178 56
kpsC YP_854335.1 capsule polysaccharide export protein KpsC Not tested PAI I APEC-O1 Protein 9e-126 47
kpsC AAZ04470.1 capsule polysaccharide export protein Virulence PAI I APEC-O1 Protein 7e-126 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phyA NP_245710.1 protein PhyA VFG0704 Protein 1e-155 56
phyA NP_245710.1 protein PhyA VFG0259 Protein 5e-179 56
phyA NP_245710.1 protein PhyA VFG0692 Protein 6e-178 55