Gene Information

Name : yfeC (PM0398)
Accession : NP_245335.1
Strain : Pasteurella multocida Pm70
Genome accession: NC_002663
Putative virulence/resistance : Virulence
Product : protein YfeC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 466600 - 467469 bp
Length : 870 bp
Strand : -
Note : -

DNA sequence :
ATGTGGGATTTATTGCTTGAACCTTTCCAATATAATTATATGGTAAAGGCAATTCTTCTTTCCGCAGCAGTAGGCGGAAT
TTGTGCTTTTATGTCTTCTTATTTAATGCTAAAAGGCTGGTCTTTAATTGGTGATGCCCTCTCTCACTCTGTCGTGCCAG
GTGTTGCCATTGCCTATGCCCTTTCCTTACCTTACGCGTTAGGCGCATTTTTTTCGGGCATTTTAGCCGCACTTTCTATT
TTGTGGATTAAATCGATCACCAAATTACGTGAAGATGCGGTAATTGGTTTTATCTTTACCACATTCTTTGCCTTAGGGTT
ATTGATTATCTCGCTTAACCCAACATCAGTTAATGTGCAAGATATCATCTTGGGCAACATTTTAGGCATTGCAGATGAAG
ACGTAACGCAAGTCGCCATCATTATTGTCATTACATTAAGTTTACTGCTGTTATTTTGGAAAGATCTCCTCTTAGTGTTT
TTTGATGAAACCCATGCGACTTCTGTTGGGCTTTCCCCCTTGCGCTATAAAGTACTGTTTTTCACTTTACTCAGTGCTTG
CGTCGTGGCTGCGTTACAAACCGTCGGCGCCATTTTAGTGATTGCTATGGTGATTACCCCCGGAGCAACCGCTTATTTGC
TAACTGACCGATTTGGAAAATTAGCGACGATTGCAGTAATATTAGGAACAACAACTAGCATCGTTGGGGTTTATCTAAGT
TATTATCTAGATGGAGCAACAGGCGGTTTAATTGTGTGTCTGCAAACTGCAATTTTCTTGCTCGCCTTTTGTTTTTCACC
GAAATATGGTGTCTTACGCCGGCAAAGTGCGGTACAAAATGGGAAAAATCAGGAGGCAAACCATGGCTGA

Protein sequence :
MWDLLLEPFQYNYMVKAILLSAAVGGICAFMSSYLMLKGWSLIGDALSHSVVPGVAIAYALSLPYALGAFFSGILAALSI
LWIKSITKLREDAVIGFIFTTFFALGLLIISLNPTSVNVQDIILGNILGIADEDVTQVAIIIVITLSLLLLFWKDLLLVF
FDETHATSVGLSPLRYKVLFFTLLSACVVAALQTVGAILVIAMVITPGATAYLLTDRFGKLATIAVILGTTTSIVGVYLS
YYLDGATGGLIVCLQTAIFLLAFCFSPKYGVLRRQSAVQNGKNQEANHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-67 62
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-67 62
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-67 62
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-67 62
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-67 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC NP_245335.1 protein YfeC BAC0441 Protein 3e-79 71
yfeC NP_245335.1 protein YfeC BAC0351 Protein 7e-68 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeC NP_245335.1 protein YfeC VFG0527 Protein 6e-68 62