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Name : serS (PM0258) Accession : NP_245195.1 Strain : Pasteurella multocida Pm70 Genome accession: NC_002663 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 290295 - 291581 bp Length : 1287 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATCGATCCAAATCTATTGCGTAATAATCTTGAGGAAGTGGCTGAAAAATTAAAAGTAAAACGTAATTTTGTGCTAGA TGTTGCCTTATTAAGTGAATTAGAAGAACAACGTAAAAGCTTGCAAGTCAAAACAGAATCACTTCAAGCAGAACGTAATG CGCGTTCAAAAAATATCGGCCAAGCGAAAGCACGTGGTGAAGATATTTCAGCATTATTAAACGAAGTGGAACATATGGGC ATTGAATTAAGTACCACAAAAGCACATTTGGATGAAGTGTTAGCTGAAATTAACCAGATCGTTCTCGCCATTCCAAATTT ACCTGCTGATGAAGTTCCGCTTGGCAAAGATGAGAGCGAAAATCTCGAAGTGTTCCGTTGGGGAACACCAAAAACCTTTG ATTTTGATGTGAAAGATCATGTGTCATTAGGTGAAGGTTTGAAAGGGCTAGATTTTGCGGCAGGAGTAAAATTAAGTGGC TCTCGTTTTGTGGTGATGAAAGGACAGATCGCCAAATTACATCGTGCGCTGTCTCAATTTATGTTAGACCTCCATACTGA GCAACATGGTTATACCGAAACCTATGTCCCTTATTTAGTTAATCACGCTACTTTATATGGTACCGGGCAATTACCAAAAT TTGGTGAGGATTTATTTCACACCAATGCGTTAGAAGGCGAACAACCTTATGCATTAATTCCAACAGCAGAAGTACCCGTT ACGAACTTAGTTCGTGATGAAATTCTCGATGAAGCGGATTTGCCTTTGAAAATGACAGCGCATACTCCTTGTTTCCGTTC TGAAGCAGGATCCTATGGGCGTGATACCCGCGGTTTAATTCGTATGCATCAATTTGATAAAGTGGAGTTGGTTCAAATTG TTGCACCTGAAACTTCAATGCAAGTGTTAGAAGAATTGACAGGACAAGCAGAAAAAGTCTTGCAATTATTAGAGTTACCT TATCGTAAAGTCTTATTATGTACAGGCGATATGGGATTCGGCTCATGCAAGACGTATGACTTAGAAGTATGGTTACCGGC TCAAAATACCTATCGTGAGATCTCTTCATGTTCAAATATGTGGGATTTCCAAGCTCGTCGCATGCAAGCGCGTTGCCGTT CTAAAACAGATAAGAAAACACGTTTAGTGCATACTTTAAACGGCTCTGGCTTAGCGGTTGGACGCACTTTGGTCGCGATT TTAGAAAATTACCAAAATGCAGATGGTACCATTACCGTTCCAAGCGTATTACGTCCATATATGGGCGGGTTAGCACAGAT TGGTTAG Protein sequence : MIDPNLLRNNLEEVAEKLKVKRNFVLDVALLSELEEQRKSLQVKTESLQAERNARSKNIGQAKARGEDISALLNEVEHMG IELSTTKAHLDEVLAEINQIVLAIPNLPADEVPLGKDESENLEVFRWGTPKTFDFDVKDHVSLGEGLKGLDFAAGVKLSG SRFVVMKGQIAKLHRALSQFMLDLHTEQHGYTETYVPYLVNHATLYGTGQLPKFGEDLFHTNALEGEQPYALIPTAEVPV TNLVRDEILDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVAPETSMQVLEELTGQAEKVLQLLELP YRKVLLCTGDMGFGSCKTYDLEVWLPAQNTYREISSCSNMWDFQARRMQARCRSKTDKKTRLVHTLNGSGLAVGRTLVAI LENYQNADGTITVPSVLRPYMGGLAQIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-106 | 55 |
