Gene Information

Name : ssb (PM1950)
Accession : NP_246889.1
Strain : Pasteurella multocida Pm70
Genome accession: NC_002663
Putative virulence/resistance : Virulence
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2186734 - 2187234 bp
Length : 501 bp
Strand : -
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA

DNA sequence : 
ATGGCTGGAGTAAATAAAGTAATTATTGTAGGAAACTTAGGTAACGATCCTGAAATCCGCACAATGCCAAATGGTGAAGC
CGTAGCCAATATCAGCGTCGCGACCAGTGAAAGCTGGATCGACAAAAATACTAACGAACGTCGTGAAGTCACCGAATGGC
ATCGCATCGTATTCTACCGTCGCCAAGCTGAAGTGGCTGGGGAATATCTGCGTAAAGGTTCAAAAGTGTATGTAGAGGGA
CGCCTAAAAACCCGTAAATGGCAAGACCAAAATGGGCAAGATCGCTACACTACCGAAATCCAAGGCGACGTGTTGCAAAT
GCTCGACAGCCGTAACGAACGTCAACAAACCGGCGGCTATGCCCCACAAACCGCTGCGCCACAATATAATGCCCCAACAG
GTAGCTACGGTGCACAACCTTCTCGTCCAGCGACAAAACCCGCTCCACAAAACGAACCTCCAATGGACATGGGCTTTGAG
GAAGATAATATTCCGTTTTGA

Protein sequence : 
MAGVNKVIIVGNLGNDPEIRTMPNGEAVANISVATSESWIDKNTNERREVTEWHRIVFYRRQAEVAGEYLRKGSKVYVEG
RLKTRKWQDQNGQDRYTTEIQGDVLQMLDSRNERQQTGGYAPQTAAPQYNAPTGSYGAQPSRPATKPAPQNEPPMDMGFE
EDNIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 3e-46 67
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 5e-34 52
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 3e-34 52
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 5e-34 52
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 5e-28 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssb NP_246889.1 single-stranded DNA-binding protein VFG0576 Protein 2e-34 56