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Name : mutS (PM1830) Accession : NP_246769.1 Strain : Pasteurella multocida Pm70 Genome accession: NC_002663 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 2066576 - 2069158 bp Length : 2583 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGGATAATTTAGACTTGCACACGCCCATGATGCGCCAATATTTGGCGCTCAAAGCCGAAAATCCCGATATTTTGTTGTT TTATCGGATGGGTGATTTTTATGAGCTTTTTTATGACGATGCCAAGAAAGCGGCGGCGTTGCTAGATATTTCCTTGACTA AACGTGGACAGTCCGCTGGGCAACCTATCCCAATGGCGGGCGTGCCTTATCATGCAGTAGAAGGTTATTTAGCCAAATTG GTGCAATTAGGGGAGTCGGTGGCGATTTGTGAGCAAGTGGGTGATCCGGCGACTTCAAAAGGTCCCGTTGAGCGCCAAGT CGTGCGGATTGTCACCCCCGGTACCGTGAGCGATGAAAGCCTCTTACCTGAACGGCAAGACAACTTGATCGCCACGGTTT ACCAAGAAAAAGATCGCTTTGGTTTGGCAGTGTTAGACATCACCTCGGGGCGTTTTCAAATCAGTGAGCCCGAGGATCGC GCGAGCTTACAAGCGGAGTTACAGCGCATTTCGCCTGTAGAGTTATTGTATTGTGAAGACTTTGTGGACATGGCATTGCT TGAGCCGTTTAAAGGGTTACGCCGGCGTCCTATTTGGGAATTTGAACTCGGTACGGCAATTCAATTACTCAATCGTCAGT TTCACACCAAAGATCTGCGTGGTTTTGGGGTGGAAAAAGCCATTTTGGGACTCTGTGCGGCAGGCTGTTTGTTACAATAT GCCAAAGATACTCAACGTACGGCATTACCGCATATTCAAAGCCTAACCTTATTACAACATTCAGAACATATACAATTAGA TGCCGCCACGCGCCGTAATTTAGAGTTAACCCAAAATCTTGCCGGTGGCAGCGAAAATACCCTCGCCTCGGTGCTCGATA AATGTGTCACCCCAATGGGAAGCCGTTTATTGAAACGTTGGATGCATCAGCCCATTCGTCAGCATGAAAAACTCATGGTG CGCCAAAATCGGATTACTGCCCTTTTGCAACAGGATTTAGTGGCAGCGATTCAGCCTTATTTACAGCAAATCGGCGATAT GGAACGGATTTTAGCCCGTGTCGCTTTGCGCTCGGCACGTCCCCGTGATTTAACTCGTTTGCGTACTGCCTTGGAACAAA TTCCGTATTTGCGCGATATTCTGGCACAACAAACTTCGTCAGATTTGACCGCACTTTTGCAGCCAATCGGTGAATTTTCA GCGCAGTTAGATTTATTACAGCGTGCCATCATTGATAATCCCCCAATGTTAATTCGTGATGGTGGCGTGATTGCTGAAGG CTACAATGCGGAACTAGATGAATGGCGCAGTTTATCGGATGGCGCCACACGCTATTTAGAAGAACTCGAACAGCGTGAGC GAGAAAGTACCGGGATTGATACGTTAAAAATCGGCTTTAATGCGGTGCATGGCTACTATATTCAAATTAGCCAAGGGCAA GCGCATAAGGCACCGATGCACTATGTGCGCCGCCAAACCCTGAAAAATGCAGAACGTTATATTATTCCAGAGCTGAAAAC GTACGAAGATAAAGTGCTGAAAGCTAAAGGTGCCGCATTGGCGTTAGAAAAACAGCTCTACGAACAATTATTTGATGAGT TACTGCCACATTTAGGGGCGTTACAACTTGCCAGTTTAACTTTAGCGGAACTGGACGTGCTCACCAATTTAGCCGAACGA GCAGAAACCCTCAATTATGTCGCGCCGCAATTTAGCGATGATATCGGGGTGCATATTCAGCAAGGTCGTCATCCTGTGGT GGAACAGGTGCTCAATGCGCCGTTTATTGCCAACCCGGTTGAGCTTCACCCACAGCGCCATTTATTGATTATCACGGGAC CGAATATGGGCGGGAAAAGCACTTATATGCGTCAAACTGCCTTGATTACATTAATGGCGTATATGGGCAGTTTTGTGCCT GCGGAAAGTGCGGTGATTGGTCCGATTGATCGTATTTTCACCCGTATTGGTGCGTCAGACGATTTGGCGTCAGGGCGTTC GACCTTTATGGTGGAGATGACCGAAATGGCGAATATTTTGCATCAAGCCACCGCCAACAGTTTGGTGTTAATTGATGAAA TTGGACGCGGTACCTCCACTTACGATGGGCTTTCTTTAGCGTGGGCTTGTGCGGAATGGTTGGCGAAAAAATTACGCTCA CTTACCTTATTTGCCACCCATTATTTTGAGCTGACGGTGTTACCTGAACAACTGGCGGGTAGTGCCAACGTGCATTTAGA TGCCATCGAGCATAATGACACCATTGCTTTTATGCACGCGGTGCAAGAGGGGGCCGCCAGCAAAAGTTACGGTTTAGCCG TGGCGGCATTGGCGGGCGTGCCACAATCGGTGATTAAACTGGCGAAACAAAAATTAGCGCAATTAGAAAAACTGTCACAA CAAAATGCCGATCAACGTATCCAAGATTTGCGCCAGCTCAATCAAACACAAGGTGAATTGGCGTTAATGGAAGAAGATGA CAGCAAAACAGCCGTTTGGGAAATGTTAGAAAAACTCGATCCCGACGAACTCAGCCCAAAACAAGCGCTGGCGTATTTGT ATCAGTTGAAGAAGTTGGTTTGA Protein sequence : MDNLDLHTPMMRQYLALKAENPDILLFYRMGDFYELFYDDAKKAAALLDISLTKRGQSAGQPIPMAGVPYHAVEGYLAKL VQLGESVAICEQVGDPATSKGPVERQVVRIVTPGTVSDESLLPERQDNLIATVYQEKDRFGLAVLDITSGRFQISEPEDR ASLQAELQRISPVELLYCEDFVDMALLEPFKGLRRRPIWEFELGTAIQLLNRQFHTKDLRGFGVEKAILGLCAAGCLLQY AKDTQRTALPHIQSLTLLQHSEHIQLDAATRRNLELTQNLAGGSENTLASVLDKCVTPMGSRLLKRWMHQPIRQHEKLMV RQNRITALLQQDLVAAIQPYLQQIGDMERILARVALRSARPRDLTRLRTALEQIPYLRDILAQQTSSDLTALLQPIGEFS AQLDLLQRAIIDNPPMLIRDGGVIAEGYNAELDEWRSLSDGATRYLEELEQRERESTGIDTLKIGFNAVHGYYIQISQGQ AHKAPMHYVRRQTLKNAERYIIPELKTYEDKVLKAKGAALALEKQLYEQLFDELLPHLGALQLASLTLAELDVLTNLAER AETLNYVAPQFSDDIGVHIQQGRHPVVEQVLNAPFIANPVELHPQRHLLIITGPNMGGKSTYMRQTALITLMAYMGSFVP AESAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATANSLVLIDEIGRGTSTYDGLSLAWACAEWLAKKLRS LTLFATHYFELTVLPEQLAGSANVHLDAIEHNDTIAFMHAVQEGAASKSYGLAVAALAGVPQSVIKLAKQKLAQLEKLSQ QNADQRIQDLRQLNQTQGELALMEEDDSKTAVWEMLEKLDPDELSPKQALAYLYQLKKLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | NP_246769.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 70 |
