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Name : clpB (PM1704) Accession : NP_246643.1 Strain : Pasteurella multocida Pm70 Genome accession: NC_002663 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1910791 - 1913358 bp Length : 2568 bp Strand : + Note : - DNA sequence : ATGAATATCGAAAAATTTACGACAAAATTTCAACAAGCACTGCAAGAGGCGCAATCTTTAGCCATTGGCAAAGATAACCA ATTTATTGAACCCGTCCATTTACTCACCGCCTTGTTAAATCAACAAGGTGGTTCCACTGCGCCAATTTTAACAGCAAGTG GGGCAAACTTACCGCTCTTGCGTAATGAATTAAATGCCGAGCTCAGTAAATTACCACAAGTGTCAGGCAGCGGTGGTGAT GTACAAGTTTCACGGAGTTTAGTGAATCTATTAAACTTGTGCGACAAGTTAGCACAGCAACGCCAAGATAAATTTATTTC CTCTGAATTGTTTTTACTGGCAGCGTTAGAAGACAAAACACTTGGTGATGTGTTGAAAAAGTGCGGTGTGAAAAAAGAAA ATTTACAACAGGCAATAGAGAAAGTCCGTGGCGGACAAAATGTGAATGATCCAAATGCGGAAGAAAGTCGCCAAGCGTTA GAAAAATATACGATTGATTTAACCGCGCGTGCAGAAAGCGGCAAACTTGACCCCGTGATTGGGCGTGATGAAGAAATTCG TCGTGCCATTCAAGTATTACAACGCCGTACCAAAAACAACCCAGTGTTAATCGGTGAACCGGGCGTGGGGAAAACTGCGA TTGTCGAAGGGCTGGCGCAACGCATTGTTAATGGTGAAGTACCCGAAGGCTTGAAAAATAAGCGCGTTCTGTCTTTAGAT ATGGGGGCATTGATTGCCGGTGCAAAATACCGTGGTGAATTTGAAGAACGTTTAAAAGCGGTGTTAAATGAACTGTCAAA AGAAGAAGGACGCGTGATTCTCTTTATTGATGAAATTCACACCATGGTGGGGGCAGGGAAAACCGATGGCGCGATGGATG CCGGTAACTTGCTCAAACCAAGCTTAGCCCGTGGGGAATTACACTGCGTGGGGGCGACAACACTAGATGAATATCGTCAA TACATAGAGAAAGATGCCGCCCTTGAGCGTCGTTTCCAAAAAGTGTTTGTTGGTGAGCCAACGGTGGAAGATACCATTGC GATCTTACGTGGGTTAAAAGAACGTTACGAAATCCACCACCATGTTCAAATTACTGACCCTGCGATTGTGGCGGCAGCGA CCCTTTCTCATCGTTATGTATCTGATCGTCAGCTACCTGATAAAGCGATTGATTTAATTGATGAAGCAGCATCGAGCATT CGTATGGAAATTGACTCTAAACCTCAGCCGTTAGATCGTTTAGAGCGCCGTATCATTCAATTAAAATTAGAGCAACAAGC GCTACAAAAAGAAGATGATGATGCGAGTCGTAAACGTTTAGCAATGCTTGAAAAAGAATTAGGTGAAAAAGAACGTGAAT ATGCAGAATTAGAAGATGTTTGGAAAGCTGAAAAAGCCGCCCTTTCAGGTACACAGCATATTAAAGCGGAGCTAGACAGT GCCAAAACACAAATGGAACAAGCTCGCCGTGCCAGTGACTTCGCAAAAATGTCGGAATTACAATACGGAGTGATCCCCGC GCTAGAAAAACAATTGGCGCAAGCAGAATCCGCTGAAGGCAAAGAAATGACTTTACTGCGCTATCGTGTGACCGACGAGG AAATTGCCGAAGTGCTTTCGCGTGCAACTGGTATTCCTGTGGCGAAGATGATGGAAGGGGAAAAAGAAAAACTCTTACGT ATGGAAGAAGAATTGCACAAACGAGTGATTGGTCAACATGAAGCCATTGAAGCAGTATCGAATGCAATTCGCCGTAGCCG TGCCGGGTTATCCGATCCAAATCGTCCAATTGGATCGTTCTTGTTCTTAGGTCCAACCGGGGTCGGGAAAACAGAACTTT GTAAAACCCTTGCCAATTTCCTGTTTGATGACGAAAACGCGATGGTGCGTATTGATATGTCAGAATTTATGGAAAAACAC AGTGTTTCACGCTTAGTGGGCGCCCCTCCGGGTTATGTGGGTTACGAAGAAGGAGGCTATTTAACCGAAGCCGTTCGTCG TCGCCCTTATTCCGTGATCTTGCTTGATGAAGTGGAAAAAGCACACCATGATGTGTTTAACATTTTATTACAAGTGTTAG ATGATGGACGCTTAACTGATGGACAAGGGCGCACTGTGGATTTCCGCAATACTGTAGTAATCATGACATCTAACTTAGGC TCACACTTGATCCAAGAAAACAGTACATTGGATTACCCAAGTATGAAAGAGTTAGTGATGTCTGTGGTGGGACAACATTT CCGCCCAGAATTTATCAACCGTATTGATGAAACCGTCGTCTTCCACCCATTAGGTAAAGAAAACATTCGTGAGATTGCGA CAATCCAACTTGCTCGCTTAATCAAACGTATGGAAAGCCATGGTTATCAATTACACTTCACCGATGCTTGCTTAGACTTC ATTGGCGAAGTAGGTTACGATCCGGTGTATGGCGCACGTCCGTTAAAACGTGCAATTCAACAAGAAATTGAGAACCCGTT GGCACAACAAATTCTGTCAGGCAAATTATTACCGAATCAATTAGTCACCATTGACTATGTTGACGGAAAAGTGATTGCCA ATCAGTAA Protein sequence : MNIEKFTTKFQQALQEAQSLAIGKDNQFIEPVHLLTALLNQQGGSTAPILTASGANLPLLRNELNAELSKLPQVSGSGGD VQVSRSLVNLLNLCDKLAQQRQDKFISSELFLLAALEDKTLGDVLKKCGVKKENLQQAIEKVRGGQNVNDPNAEESRQAL EKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLD MGALIAGAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQ YIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASSI RMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRKRLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDS AKTQMEQARRASDFAKMSELQYGVIPALEKQLAQAESAEGKEMTLLRYRVTDEEIAEVLSRATGIPVAKMMEGEKEKLLR MEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKH SVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLG SHLIQENSTLDYPSMKELVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLHFTDACLDF IGEVGYDPVYGARPLKRAIQQEIENPLAQQILSGKLLPNQLVTIDYVDGKVIANQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-154 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | NP_246643.1 | chaperone ClpB | VFG2076 | Protein | 2e-103 | 41 |
