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Name : hsdR (PM1541) Accession : NP_246480.1 Strain : Pasteurella multocida Pm70 Genome accession: NC_002663 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 1741948 - 1745121 bp Length : 3174 bp Strand : + Note : - DNA sequence : ATGATCGACGAAAGCACCCTTGAACAGGCGGCACTTGATTGGTTTAGAGAGACAGGCTGGCAAACCTTTAACGGTAAGGA ATTATTCACCGAGGGGAGAAATCCGCAGCGTCATCAATTAAGTGCGGTGATTTTAGAACCGATTTTTCGCACGCAGTTTG CTTTGCTTAATCCGCATTTACCTGTGGATTGTGTGGAGCAAGTGTTGGCAAAATTGAAGCAGGCAGAAAGCCGAGATTTG GTGGAAGCGAATCAGGCTTTTCATCGATTGCTTACTCAAGGGGTGCCAGTTACTTATAAAAAAGGCGATGACATTTGTTT TGAAACGGCGTTTTTGTTGGATTATGCCGAGCCTGAACGGAACGCCTTTTGGGCGGTGAATCAATTTGAGGTGCGAGGAC TTCATTTGCGTCGCCCTGATATTGTGTGTTTTATCAATGGGTTGCCGATTGCCATTTTGGAATTAAAAAATCCTGCCGAT GAAAAAAACGATGTGTGGAATGCGTTTCATCAACTGCAAACTTATAAAAATGATCTCTTTGATTTGCTAATGTTTAATGG TGCCTTGGCAATTTCTGATGGTGTGATCGCAAAAGTGGGTTCCTTAACGGCAGATGAAGAGCGTTTTATGCCTTGGCGTA CGGTGAAGAATGAAAATGACAAACCAATGGTAGAATGGCAATTAGAAATTTTAATTCGTGGCTTTTTCCGTCCTGATTTA TTCACTGACTATTTACATTTTTTCATCTTATTTGAGAGAAATGAGAAGAACCGTTTAATTAAGAAACAAGCTAGCTATCA TCAATTTCATGCGGTGAGAGAGGCAGTGAGAGCGACTGTGATTGCCTCGAGACCGTTATCTGACAAGGTGGTACGGGAAC CGCGAGCGAATTATGGGCGAGAGGTGCAAGTAGGCAGTAAAAAAGCAGGCGTGGTATGGCACACACAAGGGAGTGGGAAA AGTATTTCCATGTGTTGTTATGCAGGGAAATTATTGCAACAGCCCGAAATGGGTAATCCGACTTTGCTTGTGGTGACTGA TCGTAACGATTTAGATGGTCAGCTCTTCCAGCAATTTTCACTGGCAAAAGATTTATTAAAACAAGATCCCGTGCGTGCAG AAAGTCGTGAACAATTAAGGGAATTATTAGCCAGTCGTGATGTGGGCGGTGTGATTTTTACTACGGTACAGAAATTCGCC TTACAAGAGGATGAGCAAGCGCACCCGTTATTAAATGGTCGTCATAATATTGTGGTGATTTCCGATGAAGCACACCGTAG TCAATATGGCTTGAAAGCCAAATTGAACGCAAAAGGCTCATTTCAATTTGGTTATGCCAAACATATGCGTGATGCCTTGA AAAATGCGACTTTTATTGGCTTTACGGGCACACCGATTGAAACAGAAGACAAAGACACGCGAGCAGTATTTGGGGATTAT GTGTCTATCTATGATATTCAAGATGCTGTTGATGATGGTGCCACTGTGCCAATTTATTATGAATCTCGCCTTGCTCGTTT AGATATTAATCGTGCGGAGATTGAGGAATTAGCTCAACAATTCGATGAGATTGTGGAGGAAGAAGAGCAAACAGAAGCGG AACGTATTAAAGGCGAATTTACTCGTTTAGAAAAATTAGTCGGTGCTCAACCTCGTTTGCAACAAATTGCCAAGGACTTA ATCCAGCATTTTGAAAAACGGCAAGAAAGCCAAGATGGTAAGGCAATGATTGTGGCCATGAGCCGTGATACTTGTGTGCA TTTATACAATGAAATTATCGCACTCAAGCCAGAGTGGCATAACGATGACCCTAGCAAGGGCGCTATTAAAATTGTGATGA CTGGATCGGCCGCAGATAAAGCGCTGTTACAACCTCATATTTACAGTAAACAAGTCAAACAAGATTTAGAAAAACGCTTT AAAAATCCAGATGATCCTTTGAAATTGGTGATCGTACGGGATATGTGGCTGACTGGATTTGATGCGCCATGTTGTCATAC GATGTATGTGGATAAGCCAATGCGTGGGCATAATTTGATGCAGGCGATTGCGCGAGTCAACCGGGTGTTTAAAGATAAAC CAGGTGGGCTGGTGGTGGACTACATTGGTATCGCCAATGAATTAAAACAAGCCTTACATACTTATACGAACGCTAAGGGG CGCGGTAAACCGACGATTGATACCCAAGAAGCACTCAAAGTGCTATTGGAGAAAATGGATGCCATTGCGGGAATGTTTGC GACACCGTTAGAAGGTAAGGTGCTGGATATTGGTCAGTTTGAAACGCAAGCAGTCAGTTTATTACCTAAAGCGGCAAACC ATATTTTGGGGTTAGAGGACGGTAAAAAACGTTTTGCGGATTTAGTGTTGGCGGCAACCAAAGCTTATGCCTTATGTGGC ACATTAGAGCAATCTAAGACCTATCAACGCAAACTTGCCTTTTATGCTGCGGTGAAAGCGATGATGTTTAAAGAGCAGAT CGGTGATGGGAAATTGCGTAAACAGCGACAAGATCATGTTTTAAAGCAAATTTTAGATAACTCACTGATTGCGGACGGGG TGGATGATATTTTCACGCTCTGTGGGTTAGAAAAACCCAATATTGGTTTGCTATCTGATGAGTTCCTTGAAGATGTGCGC CAAATAGAACATAAAAATCTTGCCGTCGAGTTACTCGAAAAATTGCTACAGGATAATATCAAAAGTCGAAGCGCTCGCAA CTTGGTACAAGAACGTAAGTATCGTGAGCGTTTAGAGGCGACGTTAACCAAATATCACAATCGAGGTATTGAAACCGCGC AAGTGATTGAAGAACTCATTCAGATGGCCAAAGATTTTCAGGAGGCATTTAAACGTGCTGAAGATTTAGGCTTGAACAGT GATGAAATTGCCTTTTATGATGCCTTAGCCAATAACGAAAGTGCGGTACGAGAACTGGGCGATCAAATTTTAAAAGCCAT TGCGTTGGAATTGGTGAAACAATTACGCCATTCTGTCACCGTGGATTGGCAAGTGCGAGAAAGTGTGCGAGCGAGATTAC GTATTTTAGTGCGTCGTATTCTGCAAAAATATAAATACCCACCAGATAAAGCCGATGAGGCTATTGATTTAGTCTTGGAG CAGGCAGAAACCTTATCTTACGAATGGAGCGAAAAGCACGAGAGAGTTGCCTAA Protein sequence : MIDESTLEQAALDWFRETGWQTFNGKELFTEGRNPQRHQLSAVILEPIFRTQFALLNPHLPVDCVEQVLAKLKQAESRDL VEANQAFHRLLTQGVPVTYKKGDDICFETAFLLDYAEPERNAFWAVNQFEVRGLHLRRPDIVCFINGLPIAILELKNPAD EKNDVWNAFHQLQTYKNDLFDLLMFNGALAISDGVIAKVGSLTADEERFMPWRTVKNENDKPMVEWQLEILIRGFFRPDL FTDYLHFFILFERNEKNRLIKKQASYHQFHAVREAVRATVIASRPLSDKVVREPRANYGREVQVGSKKAGVVWHTQGSGK SISMCCYAGKLLQQPEMGNPTLLVVTDRNDLDGQLFQQFSLAKDLLKQDPVRAESREQLRELLASRDVGGVIFTTVQKFA LQEDEQAHPLLNGRHNIVVISDEAHRSQYGLKAKLNAKGSFQFGYAKHMRDALKNATFIGFTGTPIETEDKDTRAVFGDY VSIYDIQDAVDDGATVPIYYESRLARLDINRAEIEELAQQFDEIVEEEEQTEAERIKGEFTRLEKLVGAQPRLQQIAKDL IQHFEKRQESQDGKAMIVAMSRDTCVHLYNEIIALKPEWHNDDPSKGAIKIVMTGSAADKALLQPHIYSKQVKQDLEKRF KNPDDPLKLVIVRDMWLTGFDAPCCHTMYVDKPMRGHNLMQAIARVNRVFKDKPGGLVVDYIGIANELKQALHTYTNAKG RGKPTIDTQEALKVLLEKMDAIAGMFATPLEGKVLDIGQFETQAVSLLPKAANHILGLEDGKKRFADLVLAATKAYALCG TLEQSKTYQRKLAFYAAVKAMMFKEQIGDGKLRKQRQDHVLKQILDNSLIADGVDDIFTLCGLEKPNIGLLSDEFLEDVR QIEHKNLAVELLEKLLQDNIKSRSARNLVQERKYRERLEATLTKYHNRGIETAQVIEELIQMAKDFQEAFKRAEDLGLNS DEIAFYDALANNESAVRELGDQILKAIALELVKQLRHSVTVDWQVRESVRARLRILVRRILQKYKYPPDKADEAIDLVLE QAETLSYEWSEKHERVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 63 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 44 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 44 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 44 |
