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Name : hsdM (PM1537) Accession : NP_246476.1 Strain : Pasteurella multocida Pm70 Genome accession: NC_002663 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 1736117 - 1737823 bp Length : 1707 bp Strand : + Note : - DNA sequence : ATGAATAACAGTGAACAGCAGTATTTAAATGAACTCGACGCCAAATTATGGAAATCCGCTGACAAACTTCGTTCCAATAT AGAGGCCGCCAATTATAAACACGTCATTTTAAGTTTAATTTTCCTCAAATATGTCTCCGACGCCTTTTTAGCTCGCCAAC ACAGTATCCAACAACAATTAACCGATCCTGAACACCTCTATTATCTTGATCCCAGTTTTTATGACAGCGAGGAAGAATAC CAACAAGCCCTAGCCAACGAGCTTGAGCAATTAGATTATTACACCGAAGAAAACGTGTTTTGGGTACCGAAAACAGCCCG TTGGGATGTCTTAAAAACCAAAGCCACGACTCCAGTGGGAGCGGTATTATGGCAAGATGAACAAGGCGAAGACGTGAAAA TGCGCAATGTGTCTTGGTTGGTGGATCTGGCGTTAGACACGATCGAAAAAAGCAACGATAAACTAAAAAATATCCTCGCT CGCATTAGCCAATACCAAGTGGAAGATAACCGTTTAATTGAACTAATCAGCTTATTTTCTGACACCTATTTTGCTAATCC GGAATATCAGGGGGAAAAACTCAATTTAAAAAGCAAAGATATTTTAGGCCATGTTTATGAATATTTTCTGGGAAAATTTG CCCTCGCGGAAGGCAAAAATGGTGGCGAGTATTACACCCCGAAAAGTATCGTGAATTTAATTGTAGAAATGTTGCAACCT TATCAAGGACGTGTGTTTGACCCAGCAATGGGCAGTGGGGGATTTTTTGTGTCTAATGACAAATTTATTGAAACCCACGC CAAAGAGAAACATTATGCCAGTGATGAACAACGTCGCCGTATTTCTATTTATGGTCAAGAATCAACATCAACAACGTGGA AACTAGCAGTGATGAATATGGTGATTCGCGGTATTGACTTTAATTTTGGTAAAAAGCACGCCGACAGCTTCACTGAAGAT CAACATCCTGATTTACGCGCGGACTTTGTGATGGCAAATCCGCCATTTAATAAAGATGATTGGTGGCATGAAAGCTTAGA GCATGATGCCCGCTGGCAATACGGCACCCCACCAGTGGGCAATGCTAACTTTGCCTGGGTACAACATATGCTGTATCACC TTGCCCCAACGGGTTCTATGGCGCTGTTATTAGCTAACGGCAGTATGAGTAGCAACACCGGTGGCGAAGGGGAAATCCGT AAACGCTTGATTGATGAAGATGTGGTGGAATGTATGGTGTCATTGCCAGACAAGCTATTTACCAACACAAGAATTCCTGC CTGCATTTGGTTCTTGACCAAGGATAAAAAGAATGGTGTGTCGTTTGATAAGAAAAAACGTAATCGCAGTGGTGAGGTGC TATTTATTGACGCTCGCCAACTTGGCTATATGAAAGACCGCGTATTGCGTGATTTTACCGATGCCGACACACAAAAAATC GTACAAACCTTCCACAACTGGCAATACGGCGAAAGTTACCAAGATGAAGCGGGCTTTTGCTATTCCGCCAAACTCGCTGA CATTCAAAAACACGACTATATTTTAACCCCTGGGCGTTATGTGGGCGCCGTGGCACAAGAAGAAGACTGCGAACCCTTTG CGGAAAAAATGCAAAAACTCACCGCACTTTTAAACCAACAAATGACAGAAGGCGAACGCTTAAATGCCGAGATTAAAAAG AATCTAGCGGGGTTGGGGTATGAGTAG Protein sequence : MNNSEQQYLNELDAKLWKSADKLRSNIEAANYKHVILSLIFLKYVSDAFLARQHSIQQQLTDPEHLYYLDPSFYDSEEEY QQALANELEQLDYYTEENVFWVPKTARWDVLKTKATTPVGAVLWQDEQGEDVKMRNVSWLVDLALDTIEKSNDKLKNILA RISQYQVEDNRLIELISLFSDTYFANPEYQGEKLNLKSKDILGHVYEYFLGKFALAEGKNGGEYYTPKSIVNLIVEMLQP YQGRVFDPAMGSGGFFVSNDKFIETHAKEKHYASDEQRRRISIYGQESTSTTWKLAVMNMVIRGIDFNFGKKHADSFTED QHPDLRADFVMANPPFNKDDWWHESLEHDARWQYGTPPVGNANFAWVQHMLYHLAPTGSMALLLANGSMSSNTGGEGEIR KRLIDEDVVECMVSLPDKLFTNTRIPACIWFLTKDKKNGVSFDKKKRNRSGEVLFIDARQLGYMKDRVLRDFTDADTQKI VQTFHNWQYGESYQDEAGFCYSAKLADIQKHDYILTPGRYVGAVAQEEDCEPFAEKMQKLTALLNQQMTEGERLNAEIKK NLAGLGYE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 0.0 | 69 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 3e-118 | 44 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 5e-118 | 44 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 9e-119 | 44 |
