Gene Information

Name : vatB (PM1197)
Accession : NP_246134.1
Strain : Pasteurella multocida Pm70
Genome accession: NC_002663
Putative virulence/resistance : Resistance
Product : VatB protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 1391483 - 1392106 bp
Length : 624 bp
Strand : +
Note : -

DNA sequence : 
ATGCGATTTCCTGATAAAGATCAGATTTTCCCTATCAAACATTATCACCGACTGTGCTTTTTAAAAAACTTAGTTCGTCA
TCCTAATATTATTGTGGGGGATTTTACCTACTACGATGATGCAGAGAATGTGGAAAATTTTGAGAAAAATGTGAAATACC
ATTTTGACTTTTTAGGCGATAAATTGATCATCGGTAAATTTTGCATGATTGGATCGGATGTGAAATTTATTATGAATGGC
GCCAATCATCAAATGAATGCCATCTCCACTTACCCATTTGGGATTTTTGGTTATGAATGGGCAAAAGCGTTACCGGAGAA
AGCCGAATTATCGAGCAAAGGGGATACGGTTATTGGGAATGAGGTTTGGATTGGCTATAACGCCACGATTATGCCAGGCG
TAAAAATTGGCGATGGCGCGATCATTGGCACAAATTCGGTTGTCACCAAGAATGTGCCACCTTATGCGATTGTCGCAGGA
AATCCCGCTCGCGTGATTAGAAAACGTTTCTCACCTGAAAAAATTGAACAATTATTAGCATTAAAATGGTGGGATTGGGA
GATTGAGAAAATCACGCGTAATCTTGACTTTTTAACTGGCAAAATCAGTGACCCGATTGAGTAA

Protein sequence : 
MRFPDKDQIFPIKHYHRLCFLKNLVRHPNIIVGDFTYYDDAENVENFEKNVKYHFDFLGDKLIIGKFCMIGSDVKFIMNG
ANHQMNAISTYPFGIFGYEWAKALPEKAELSSKGDTVIGNEVWIGYNATIMPGVKIGDGAIIGTNSVVTKNVPPYAIVAG
NPARVIRKRFSPEKIEQLLALKWWDWEIEKITRNLDFLTGKISDPIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-29 45
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-29 45
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 1e-29 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vatB NP_246134.1 VatB protein AM180355.1.gene2499. Protein 3e-45 47
vatB NP_246134.1 VatB protein AF322577.2.gene4.p01 Protein 5e-30 45
vatB NP_246134.1 VatB protein AY740681.1.gene5.p01 Protein 5e-30 45
vatB NP_246134.1 VatB protein AY123251.gene2.p01 Protein 3e-30 44
vatB NP_246134.1 VatB protein NC_002516.2.878374.p Protein 7e-29 44
vatB NP_246134.1 VatB protein JF268688.1.gene6.p01 Protein 1e-29 43
vatB NP_246134.1 VatB protein CP001581.1.gene990.p Protein 1e-32 42