Gene Information

Name : rfbP (PM1011)
Accession : NP_245948.1
Strain : Pasteurella multocida Pm70
Genome accession: NC_002663
Putative virulence/resistance : Virulence
Product : protein RfbP
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 1192781 - 1193383 bp
Length : 603 bp
Strand : +
Note : -

DNA sequence : 
ATGCTAAAACGTTTTCTCGATATTGTGATTTCAGCCACTGCGCTAATTTTACTTTCTCCCCTATTTTTAATTATTGCTTA
TCAAGTAAAAAAAAATCTAGGGACGCCTATTTTATTTCATCAGATGCGCCCTGGGCGATATGGTAAAGCATTTAACATGA
TCAAATTCCGCACAATGAAGGACAGCAGAAATGAAAAAGGCGAACTTTTACCTGATAGTGAACGATTAACACCCTTTGGT
CATTTCCTACGTTCAAGTAGCCTAGATGAGTTACCGGAATTATGGAATGTCTTAAAAGGCGATATGAGTTTAGTTGGACC
TCGTCCTCTCTTAATGGAATATCTCCCCTTATACAATGCTGAACAAGCTAAACGGCATAACGTGCGCCCCGGCATTACCG
GTTATGCCCAAGTTAACGGGCGTAATGCAATCAGTTGGGAACAAAAATTCAAATTAGATGTTTGGTACGTAGAAAATCAA
TCGTTGTGGCTAGATATCAAGATTCTCTTGAAAACCCTCAACGTCGTCATTTTTCGCAAAAATGTTAACGATCAATCGGG
GCATTCGATGCCGAGATTTTTAGGTGATACGGAGAAAAAATAA

Protein sequence : 
MLKRFLDIVISATALILLSPLFLIIAYQVKKNLGTPILFHQMRPGRYGKAFNMIKFRTMKDSRNEKGELLPDSERLTPFG
HFLRSSSLDELPELWNVLKGDMSLVGPRPLLMEYLPLYNAEQAKRHNVRPGITGYAQVNGRNAISWEQKFKLDVWYVENQ
SLWLDIKILLKTLNVVIFRKNVNDQSGHSMPRFLGDTEKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 4e-25 42
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 9e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rfbP NP_245948.1 protein RfbP VFG1309 Protein 9e-28 41
rfbP NP_245948.1 protein RfbP VFG1369 Protein 6e-22 41