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Name : copB (L70979) Accession : NP_267007.1 Strain : Lactococcus lactis IL1403 Genome accession: NC_002662 Putative virulence/resistance : Resistance Product : copper-potassium transporting ATPase B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 871221 - 873308 bp Length : 2088 bp Strand : - Note : transort and binding protein, cations DNA sequence : ATGTCAAATAAAACTCATTCGTCTAATCACGATGAAATGATGTCTGAGCATCATCATAATCATGAAATAATGGATATGGA GCACGAAAACCATGAGATGCACAACATGCACAATATGGATAATATGCATGATATGGACAATATGGATATGATGAATCATG GAGGACACATGATGCATATGGGTGATATGAGTAAAAAGCTCAAAGTGGCTATCATTCTTATGATTCCGCTACTACTCATT TCACCAATCGCTGGCTTTACTATCCTTAAATTCCCCGGAAGTGAAATTTTGCAACTTATACTTGGTACAATTATCTTCTT TTACTCTGGGACTCCTTTTTTTAGCGGAGCAAAAGGTGAATTAAAAAGCCGTAAGCCAGCCATGATGATGCTGATTACAA TGGGAATTACCGTTGCCTATGCTTATTCTGTTTATGCCACAATTATGAGTCTTAACGGACATATGGGCATGAACTTCTGG TTTGAACTGGCAACTTTAATTGTCATTATGTTGATTGGTCACCTGATTGAGATGAAAGCAATCATGGGTGCTGGCGATGC ATTGAAAGATTTAGCAAGCCTTGTTCCCAAAAAAGCTCACTTAAAAAGTGGGAAGGATGTGGAGCTTTCAGAACTAAAAG TTGGCGATTTGCTTTTAGTGAAAGAAAATGAAAAAATTCCTGCAGATGGCCTTATATTAAGTGAAGCGCTCGTTGATGAG TCAATGATTACTGGTGAAAGCCGAGCAGTCAATAAAAAAACAAATGACCTTGTTTATGGTGGTTCCCTCAATCAAAACCA ACCATTTGAGATGAAAGTCACAACCCTTGGAAAAGATTCATTTCTCAATCAAGTGGCCGAATTAGTCAAGAAAGCCCAAG CTCAAAAATCTAATTTGGAAAATATGGCTGACAGAGTGGCTGGTTACCTTTTCTATGCTGCACTTATTGTCGGTATCTTC TCATTAATTTTTTGGACAATTAGCTCTAACTTTAGTTTTGCTCTACTTCTTGCGGTTTCTGTTTTTGTAATTGCATGTCC ACACGCTTTAGGTCTTGCGGTTCCACTTGTTGTTTCTCGCCTAACCAGTATTTCTGCTAAAAATGGTTTATTAATTCAAA ACAGAACTTCTCTAGAAAAAATAAATACAATTAAATATGCCTTAATGGATAAAACGGGAACATTAACTGACGGTAAGTTT ATTGTTCGTAATGTTATTGATTTTACTGATGAAACAGACATTCTCCAAATCATGGCAGCACTTGAAGGAAGTTCCACTCA CCCGATTGCTCAATCAATCGTTGCAGCTGCTAAACCTCTTGGAAATCTAAAAGTTGAAGCGGTTGAAAATATTCCAGGAG TTGGGATTAAAGGGCAAGTTAATCAAAACTTTTATCAAATTGTTAACTATAAATATCTTCGTGAAAATCAACTTTCTTAT GATGAACAAAAGATTGCTCAATATTTAGATTTAGGTTTAACTGTATCTTTCCTAATCAATGAACAACAAGATGTTTTAGG ATTTATTGCCTTAGGAGATTCTCCTAAAGCAGACGCGAAAGCCTTTATTAATGGTTTATTAGCCCAAGGAATTACCCCTG TTATGCTCACGGGTGATAATAAAGAAACTGCTAAAAAAATTGCTAGTGCACTAAATATTCCCGAATTTAGAGCGGAATTA AAACCTGAAGATAAAGCAGAAATTGTGAAAGAGTACCAAAAGAAAGCCGGCGTGCTTTTCATTGGTGATGGTGTCAATGA TTCCCCAGCTCTTGCAACTGCTACGATTGGTTTTGCGATTGGAGCAGGAACTTCGGTTGCTATCAGTACCGCTGATGTCG TCCTAGTTAACTCCAATCCAAGTGACGTCTTGGATATGATTAATATCTCCAAACGCATGCTTAGAAAAATGAAACAAAAC CTCTGGTTTGGAGCAGGCTATAACATTATTGCTATTCCTGTTGCAGCGGGTATTCTTTATCCATTTACAGGGATTTATAT TGACCCTCTCATTGCAGCAGTCCTGATGTCAATCTCAACCGTGATTGTCTCAATCAACGCGATGGGATTGAGGTATGATA AAAAATAG Protein sequence : MSNKTHSSNHDEMMSEHHHNHEIMDMEHENHEMHNMHNMDNMHDMDNMDMMNHGGHMMHMGDMSKKLKVAIILMIPLLLI SPIAGFTILKFPGSEILQLILGTIIFFYSGTPFFSGAKGELKSRKPAMMMLITMGITVAYAYSVYATIMSLNGHMGMNFW FELATLIVIMLIGHLIEMKAIMGAGDALKDLASLVPKKAHLKSGKDVELSELKVGDLLLVKENEKIPADGLILSEALVDE SMITGESRAVNKKTNDLVYGGSLNQNQPFEMKVTTLGKDSFLNQVAELVKKAQAQKSNLENMADRVAGYLFYAALIVGIF SLIFWTISSNFSFALLLAVSVFVIACPHALGLAVPLVVSRLTSISAKNGLLIQNRTSLEKINTIKYALMDKTGTLTDGKF IVRNVIDFTDETDILQIMAALEGSSTHPIAQSIVAAAKPLGNLKVEAVENIPGVGIKGQVNQNFYQIVNYKYLRENQLSY DEQKIAQYLDLGLTVSFLINEQQDVLGFIALGDSPKADAKAFINGLLAQGITPVMLTGDNKETAKKIASALNIPEFRAEL KPEDKAEIVKEYQKKAGVLFIGDGVNDSPALATATIGFAIGAGTSVAISTADVVLVNSNPSDVLDMINISKRMLRKMKQN LWFGAGYNIIAIPVAAGILYPFTGIYIDPLIAAVLMSISTVIVSINAMGLRYDKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 2e-101 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| copB | NP_267007.1 | copper-potassium transporting ATPase B | BAC0079 | Protein | 3e-120 | 49 |
| copB | NP_267007.1 | copper-potassium transporting ATPase B | BAC0629 | Protein | 4e-109 | 46 |
| copB | NP_267007.1 | copper-potassium transporting ATPase B | BAC0383 | Protein | 1e-109 | 46 |
