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Name : choQ (L64737) Accession : NP_267003.1 Strain : Lactococcus lactis IL1403 Genome accession: NC_002662 Putative virulence/resistance : Unknown Product : choline ABC transporter ATP binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : - Position : 865009 - 865926 bp Length : 918 bp Strand : + Note : transport and binding protein; amino acids, peptides and amines; maybe involved in osmoprotection; substrate can be also proline or glycine DNA sequence : ATGATTGAATTCCAGAATGTGTCCAAGGCTTTTGCTAACAAAAAAATTCTTGATCATGCTAATTTTACAATTAAAGACCA AGAGTTTTTTGTGTTAGTGGGGCCGAGTGGAAGTGGGAAAACGACCACTTTAAAAATGATTAATCAATTAGTCACTCACA GTGAGGGAAAAATATTAATCAATAATGAAGAAATATCAACGGCAAATTTACGAAAATTGCGCTTATCTGTGGGCTATGTG CTGCAGCAAATTGCTCTCTTTCCTAATTTGACTGTCTCAGAAAATATTGCTTTAATTCCTGAAATGAAGGGGTGGGATAA AGCAAAAATTGCTGACAGAACCAATGAGCTACTTGATTTAGTTGGTTTGAATCCTAAAGATTACGCTCAGCGCCAACCTA GTGAATTATCAGGTGGTGAGCAACAGAGGGTAGGAATTTTACGAGCCATTGCCGCAAATCCCAAAATTGTCTTAATGGAT GAACCTTTTTCAGCACTTGACCCAATTTCACGACGTCAGTTACAAATATTTATCAAAGACTTACAGAAAAAAATGAATTT AACAGTGGTCTTTGTGACACATGACTTAGATGAAGCGCTCTATTTAGCTGACAGAGTCGCTGTAATGAATGATGGATTAA TCCAACAAATTGCTGAACCAGCAGATATCTATCAACATCCGGCAAATGATTTTGTTAAAACATTTTTTAAAGAATACCGT CAGAATTTATCAACGGTTTCTGTTGAAAATTTATTACTGACAGAGCTGTCAGTAAATCCAGAAGCGCAAGAAGTTGCTGA CAATACGGCTATTTCGGAAATAATTAATCGTCTTTCTGATAAGGAAGTTTTAAAATACAAGGGCAAGTCAATTTCCTCAG ATGATATTATATGCTATATCGCAGGAGGTGACAAATGA Protein sequence : MIEFQNVSKAFANKKILDHANFTIKDQEFFVLVGPSGSGKTTTLKMINQLVTHSEGKILINNEEISTANLRKLRLSVGYV LQQIALFPNLTVSENIALIPEMKGWDKAKIADRTNELLDLVGLNPKDYAQRQPSELSGGEQQRVGILRAIAANPKIVLMD EPFSALDPISRRQLQIFIKDLQKKMNLTVVFVTHDLDEALYLADRVAVMNDGLIQQIAEPADIYQHPANDFVKTFFKEYR QNLSTVSVENLLLTELSVNPEAQEVADNTAISEIINRLSDKEVLKYKGKSISSDDIICYIAGGDK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-48 | 48 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 6e-49 | 48 |
