Gene Information

Name : ygfA (L52030)
Accession : NP_266815.1
Strain : Lactococcus lactis IL1403
Genome accession: NC_002662
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 652010 - 652681 bp
Length : 672 bp
Strand : -
Note : transport and binding protein

DNA sequence :

ATGAAAACAATTCTTAAAATGGAAAATGTAAAAAAATCTTTTGGTAGTGGTCATAATGAGATTCAGGCACTCAAAGGAAT
CGATTTAGCAGTCAATCAAGGAGAATTTGTTTCAATTATTGGTCCCTCCGGTTCAGGCAAAAGTACATTTCTCACAATTG
CAGGTGGTTTACAAAGTCCAACTTCTGGGAACATTTCAATCAATGGCTTAGATTTTACACCATTGTCAGAAAAAAAACGT
TCTAAACTTAGATTTAAAGAAATAGGTTTCATCCTCCAAAGTTCTAATTTGATTCCTTATTTGACTATTGAAGAACAATT
TCTCCTTATTGATAAAATCAATCACGAAAAACTAACTTCTAAAAAAGGGATTGAACTTCTTAAATCACTTGATATTTTAG
ACTTAAAAGATAAACATCCTAGTGATCTTTCTGGTGGTGAAAGACAAAGGGCAGCTATTGCTCGTGCTCTCTTTAATGAA
CCAAATTTAATTTTGGCGGATGAACCAACAGCAAGTTTAGACACTGAGCATGCTTATCAGGTTGTTGAATTATTAAGACA
AGAAGCTCATTTGAAGAATAAAGCAACAATCATGGTCACTCATGACCAAAGAATGATTAAAAATAGTGACAGTATTTATA
AGATTGAAGATGGACTCTTATCAAAAATCTAA

Protein sequence :

MKTILKMENVKKSFGSGHNEIQALKGIDLAVNQGEFVSIIGPSGSGKSTFLTIAGGLQSPTSGNISINGLDFTPLSEKKR
SKLRFKEIGFILQSSNLIPYLTIEEQFLLIDKINHEKLTSKKGIELLKSLDILDLKDKHPSDLSGGERQRAAIARALFNE
PNLILADEPTASLDTEHAYQVVELLRQEAHLKNKATIMVTHDQRMIKNSDSIYKIEDGLLSKI

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAP55232.1	unknown	Not tested	SaPIbov2	Protein	3e-47	49
SARLGA251_00480	YP_005754062.1	ABC-type transport system ATPase	Not tested	Type-XI SCCmec	Protein	2e-40	47

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
ygfA	NP_266815.1	ABC transporter ATP-binding protein	NC_012469.1.7686878.	Protein	4e-29	42