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Name : hsdM (L0309) Accession : NP_266807.1 Strain : Lactococcus lactis IL1403 Genome accession: NC_002662 Putative virulence/resistance : Unknown Product : type I restriction enzyme M protein Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 3.1.21.3 Position : 643807 - 645354 bp Length : 1548 bp Strand : + Note : - DNA sequence : ATGGCATTATCAAATGAACAAAAAAATAAAATGTGGGCCCTCTTAAATCAAACCCGAGGACAGATTGGTTTAACCGCCTA TAAAGACTACATTTTTGGCTTACTATTTTATAAATATTTATCAGAAAAGGCCACACAATGGCTGGGAGAAGTTTTACGAG GAGACACTTGGGAAAATGTTTATGATCAAGATCCTGTAAGAGCCTTAGACTATATGAAACAAAAGCTCGGTTATGCCATC CAACCGAAGGAATTTTTTAAAGATTGGGAAGCTGCCATTCATGAAGAACGATTTAACATTCCAATGATTTCAGATACATT TGGCCATTTTAATCAGCAAATTGCTTTTGAAGCTAAAGATGATTTTGAAGGCATCTTTGATGGGATGCGTTTTGATAGTT CAGATTTAGGAAGTAATGCGCAAGCTCGAGCAAGTGTGATGATCTCGATGATTGAGTTACTCTCTGCCCCTGAGTTTGAT CTCTCTACAGGAGGGGACACCGTTTCAGATATCTACGAATACTTGTTAGAAAAGTTTGCGACCGTATTGGCCTCAGACAT GGGACAATACTATACTCCCAAAGAAATTTCAGAGGTCATGGCTCGTATTTTGACTTTTGGTAAAGCCGACGAAGACAATT TTTCTATTTATGATCCCGCGGTCGGTTCAGCTTCTCTCTTAATTACTACCGCCAGTCATATGAAACATTCCAATCAAAGG GGAGCGATTAAATACTTTGGTCAAGAAAAAGATGCCACCCCTTACCGATTGGCTCGAATGAATTTAATGATGCATAACAT TGAATACAATGATATTCAGATCCATCATGCGGATACTTTGGAAAGCGATTGGCCTGACGGAGTCATTGAAGGGAAAGATA CGCCTCGAATGTTTGACGCAGTGATGGCTAATCCACCTTATTCTGCCCATTGGAATAATAAGGATCGGGAAGATGACCCT CGATTTCGTGAATATGGCATTGCGCCAAAAACTAAAGCGGACTATTCTTTCTTGTTGCATTGTTTGTACCATACCAAAGA GAGTGGCCGTGTGGCCATTATTCTCCCACACGGGGTCTTGTTTAGAGGCGCTGCGGAAGGACGGATTCGAAAAGCTTTGA TTGATAAACATCAAATTGAAGCGGTAATTGGTTTTCCAGATAAACTCTTTTTGAACACAGGCATTCCCGTTTGTGTCTTA ATTCTTAAAAAGAATCGAGCAAACTCTGATATTCTTTTTGTGGACGCCAGTCAAGGCTTTGAAAAGATGAAGAATCAAAA ACAATTGCGCCCAGAAGATATTGACAAGATCACTGAAACAGTCATTCATCGCAAGGCGGTTGATAAATATAGCCACTTAG CAACGCTTGAGGAAGTCATTGAGAATGATTACAACTTAAATATTCCGCGTTATGTGGATACCTTTGAAGAGGAAGAATCG ATTGACTTAGCGGATATTCAAGGTCAAATAGATGAAGTAGACGCAGAGATTGCGAAAGCTAATCAAACCTTAGCAAACTA CTTTAAGGAACTGGGAGTGCTAAAATGA Protein sequence : MALSNEQKNKMWALLNQTRGQIGLTAYKDYIFGLLFYKYLSEKATQWLGEVLRGDTWENVYDQDPVRALDYMKQKLGYAI QPKEFFKDWEAAIHEERFNIPMISDTFGHFNQQIAFEAKDDFEGIFDGMRFDSSDLGSNAQARASVMISMIELLSAPEFD LSTGGDTVSDIYEYLLEKFATVLASDMGQYYTPKEISEVMARILTFGKADEDNFSIYDPAVGSASLLITTASHMKHSNQR GAIKYFGQEKDATPYRLARMNLMMHNIEYNDIQIHHADTLESDWPDGVIEGKDTPRMFDAVMANPPYSAHWNNKDREDDP RFREYGIAPKTKADYSFLLHCLYHTKESGRVAIILPHGVLFRGAAEGRIRKALIDKHQIEAVIGFPDKLFLNTGIPVCVL ILKKNRANSDILFVDASQGFEKMKNQKQLRPEDIDKITETVIHRKAVDKYSHLATLEEVIENDYNLNIPRYVDTFEEEES IDLADIQGQIDEVDAEIAKANQTLANYFKELGVLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAMSHR1132_03780 | YP_005324900.1 | putative type I restriction enzyme modification protein | Not tested | vSa¥á | Protein | 3e-94 | 41 |
| SAMSHR1132_16570 | YP_005326167.1 | restriction-modification system, M subunit | Not tested | vSa¥â | Protein | 2e-94 | 41 |
| SSP0053 | YP_300143.1 | type I restriction-modification system methyltransferase subunit | Not tested | SCC15305cap | Protein | 1e-95 | 41 |
