|
Name : tra1077D (L0469) Accession : NP_266795.1 Strain : Lactococcus lactis IL1403 Genome accession: NC_002662 Putative virulence/resistance : Unknown Product : IS1077D transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 627782 - 628465 bp Length : 684 bp Strand : - Note : evidence experimental PMID:1328163; transposon related function. IS3/IS150/IS904 family transposase DNA sequence : ATGAGTGAATTACTTAAGCAACGTGGCTATCACGTCAACCACAAGAAGGTACAGCGCTTAATGAAGAAGCTAGGGCTTCG TGTGACGTCTTATTGGCACAAATCACGTAAATATAATTCATATAAAGGAAAAGTAGGGACGGTAGCTAAAAATAAATTAC ACAGACGATTCAGAACTTCCACTCCTCATCAAAAAATCACAACAGATACGACAGAATTCAAATATTATGAAGATGGAATT CAGAAAAAGTGTTATCTCAATCCTTACATTGATTTATTTAATAGCGAGGTGATTAGTTATCATATCTCTAAACAACCCTC TTATCAATCAATTGATATTGCTCTAAATCAAGCCTTAGCTGTGACATCTGATTGTCCTTATCGACGTACTTTCCACTCAG ATCAAGGATGGGGATACCAAATGAGAGACTATGTTTCTAAATTAAAATCTCATAGAATTTTTCAGTCTATGAGCCGTAAA GGAAACGGTCATGATAATTCAGTTATGGAGAATTTCTTTGGGCTACTTAAACAAGAAATTTACTACGGACATATCTTCTC GTCTTTCGAAGAACTTGAACAGGTTATTGTAATCTGGATTAGGTACTATAATACAAAACGAATCAAACAAAAATTGAACT GGATGAGTCCAATTCAATTTCGCTTGAATTACCAAAACAATTAA Protein sequence : MSELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKSRKYNSYKGKVGTVAKNKLHRRFRTSTPHQKITTDTTEFKYYEDGI QKKCYLNPYIDLFNSEVISYHISKQPSYQSIDIALNQALAVTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRK GNGHDNSVMENFFGLLKQEIYYGHIFSSFEELEQVIVIWIRYYNTKRIKQKLNWMSPIQFRLNYQNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 1e-39 | 49 |
| SEQ_0791 | YP_002746129.1 | transposase | Not tested | ¥ÕSeq2 | Protein | 2e-36 | 47 |
| SEQ_1760 | YP_002746996.1 | transposase | Not tested | ¥ÕSeq3 | Protein | 2e-36 | 47 |
| APECO1_1088 | YP_853108.1 | transposase subunit | Not tested | PAI IV APEC-O1 | Protein | 4e-37 | 46 |
