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Name : yciC (L84502) Accession : NP_266441.1 Strain : Lactococcus lactis IL1403 Genome accession: NC_002662 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 284496 - 286634 bp Length : 2139 bp Strand : + Note : similar to ydcI of Bacillus subtilis; contains has S1 motif; similar to tex (toxin expression regulator) genes DNA sequence : GTGGAAAATGTTAAAAAAATTGCTGAATTGTTGAATATTAAAAATTCACAAGTTGAAAAAGTATTAGAATTGACGGCAGA GGGGAACACAGTTCCGTTTATTGCTCGTTATCGTAAAGAAGCAACAGGTTCACTTGACGAAGTTGAAATCAAAAAAATTA TTGATGAAGATAATTTACTGACAAAATTATCAGAACGTAAAACGGCTGTTTTGTCAAAAATTGAAGAGCTTGGTAAGTTG ACTGATTCGCTAAAAGCACAAATTTTGGCTGCTGAAAAACTAACAGAAGTTGAAGATTTATATCTGCCTTACAAAGAAAA ACGGCGCACAAAAGCAACGATTGCAAAGGAAAATGGTTTATTTCCTTTGGCTCAATTGATTGTAAAAAATTCAGCGAATC TTGAAGAAGAAGCTGAAAAATTTGTCAATGAGAATTTTACAAGCCCTCAAAAAGCTTTGGAAGGTGCTGTGGATATCTTG TCAGAAGCGATTTCTGAGGATGCACGTTTGCGCTCATGGCTGACCGGTGAAATCAAAAACAATAGTTTACTGACAAGTAG TTTGAAAAAAGATGCCGTTGATGAAAAGCAAGTTTTTCAAATGTATTATGAATTCTCAGAAAAAGTTTCAGAATTACCAA ATTATCGTGTATTGGCTTTAAACCGTGGTGAAAAATTGGGGATTCTGTCAGTAAAATTTGAAAATAACGAAGATAAAATT TTACGTTATTTTGCCGCCCGTTTTGCTGCTCAAAATAATCCAATGATGCAAGTGGCGATTAAAGATGCTGTCAAGAAAAA ATTGATTCCGGCTATGGAACGTAGTATTCGGACTGAATTGACAGAAAAAGCTGAAGCATCTGCCATCGAAGTTTTTGGCG AAAATTTGAAAAATTTATTATTGGTGGCTCCGCTTAAAGGGCGTGTAGTCATGGGATTTGACCCTGCTTACCGTACTGGA GCAAAGCTTGCTATTGTTGATGAGACAGGTAAATTATTGATGACAACGGTCATTTATCCTGTGAAGCCAGCAAATGCAGG TCAAATTGCTCAAGCGAAAAAAGATTTAGCAAAATTCATTCGAGAATATGGTGTGAATATGATTGCGATTGGGAATGGAA CTGCCAGTCGCGAATCTGAAAGTTTTGTTGCAGAAGTACTCAAGGAAAATAATTTTTCTGATGTTTATTATGTGATTGTC AGTGAATCTGGAGCCTCTGTTTATTCAGCGAGCGAGTTGGCACGTGAAGAATTTCCAGAATTGACTGTTGAAAAACGTTC AGCAATTTCGATTGCACGCCGTTTGCAAGATCCATTGGCTGAACTTGTAAAAATCGAACCAAAAGCCATTGGTGTTGGTC AATATCAACATGATGTTTCTGAGAAAAAATTAACAGAAAATCTTGATTTTGTCGTGGAAACAGTAGTTAACCAAGTTGGT GTTAATGTCAATACAGCCAGTCCTAGTTTGCTTTCACACGTAGCTGGCCTTAATAAAAGTTTGGCACAGAATGTAGTAAA ATATCGTGAAGAAAATGGCGCACTCAAAACAAGAGCGGAACTAAAAAAAGTCCCACGTTTGGGAGCTAAAGCATTTGAAC AAGCGGCAGGTTTCTTAAGAATTCCAGAAGGTAAAAATTTCCTTGACAACACCGGTGTTCACCCAGAATCTTATAAAGTG ACGGAACAACTTTTGGCGGAAATTTCCGCTGATAAACCTGTCAGTAACGAAGAATTGCTGACCAAACTTTCATCAGTAAA TATTCCTGAAATGGCTGAAAAACTTGGTCTTGGTCAGGAAACATTGACTGATATTATCAATGATTTACAAAAACCAGGCC GTGATTTGCGTGATAGTTTTGATGCCCCAATTTTAAGACAAGATGTTTTGTCAGCTGGAGATTTACAAATTGGTCAACAA CTTGAAGGTGTAGTTCGTAATGTTGTTGATTTCGGTGCCTTTATTGATATCGGAATTAAAAATGATGGCTTGGCACACGT TTCTGATTTGAGTAAATCTTTTGTCAAAAATCCAAGTGATGTTGTCGCTGTAGGGCAAATCGTAACGGTTTGGGTTAAAT CTCTCGATTTACAAAGAGGGAAAATTAATTTAACCTTAGTGAACCCACGAGAAAAATAA Protein sequence : MENVKKIAELLNIKNSQVEKVLELTAEGNTVPFIARYRKEATGSLDEVEIKKIIDEDNLLTKLSERKTAVLSKIEELGKL TDSLKAQILAAEKLTEVEDLYLPYKEKRRTKATIAKENGLFPLAQLIVKNSANLEEEAEKFVNENFTSPQKALEGAVDIL SEAISEDARLRSWLTGEIKNNSLLTSSLKKDAVDEKQVFQMYYEFSEKVSELPNYRVLALNRGEKLGILSVKFENNEDKI LRYFAARFAAQNNPMMQVAIKDAVKKKLIPAMERSIRTELTEKAEASAIEVFGENLKNLLLVAPLKGRVVMGFDPAYRTG AKLAIVDETGKLLMTTVIYPVKPANAGQIAQAKKDLAKFIREYGVNMIAIGNGTASRESESFVAEVLKENNFSDVYYVIV SESGASVYSASELAREEFPELTVEKRSAISIARRLQDPLAELVKIEPKAIGVGQYQHDVSEKKLTENLDFVVETVVNQVG VNVNTASPSLLSHVAGLNKSLAQNVVKYREENGALKTRAELKKVPRLGAKAFEQAAGFLRIPEGKNFLDNTGVHPESYKV TEQLLAEISADKPVSNEELLTKLSSVNIPEMAEKLGLGQETLTDIINDLQKPGRDLRDSFDAPILRQDVLSAGDLQIGQQ LEGVVRNVVDFGAFIDIGIKNDGLAHVSDLSKSFVKNPSDVVAVGQIVTVWVKSLDLQRGKINLTLVNPREK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 3e-138 | 46 |
