|
Name : ycfB (L50637) Accession : NP_266410.1 Strain : Lactococcus lactis IL1403 Genome accession: NC_002662 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : - Position : 250701 - 251447 bp Length : 747 bp Strand : + Note : transport and binding protein DNA sequence : ATGAAATCACCGATTGCTATTAATGATATTAGTGTGAAATTTGGCGATAAGGCAATATTAGACCATTTATCCTATGAATT TGAAAGTGGAAAAATTATTTGTTTGATTGGACCTTCTGGAGCTGGTAAGTCAACCTTTATCAAGGCCATTGTTGGAATGC AAAAATTGGATTCTGGCAATGTTAAGATTCTTGAAAGAAAAATTCCTGACAGAGAAGTATTAGGGAAATTAGGCTATATG GCGCAAGAAGACGCCCTATTTAAGGAATTGACCGGCAAACAAAATTTAGAATTTTTTGGTTCTTTGCAAGGAATCAAAAA AAAGGATTTACAAGGAAAACTTGATAAGGCAGCTGCTACAGTAAATCTGACTAAGCAGTTAAATCAATCAATTTCTAATT ATTCAGGAGGAATGCAAAGGCGCTTATCACTCGCTATTGCTCTGCAAACGGATGCTCCGATTTTACTTTTAGATGAACCA ACTGTTGGGATTGATCCAGAATTGCGTCAAGAAATTTGGGAAGAGCTGCGAAATCAAGCAAATCAAGGGAAAACAATATT AATTACGACGCATGTTATGGATGAAGCTGAACGTTGTGATGTCGTACTGATGCTTAGAAATGGTAAATTTATAGCAGAAG GTTCGCCAAAGGAAATTAAGGAAAAGTATCAAGTTGCCTCGGTTGAGGAAGCTTTTATTGTTGCGGGAAAAAATTTAGAG TTACAAAATAAGGGGGCAGCGAAATGA Protein sequence : MKSPIAINDISVKFGDKAILDHLSYEFESGKIICLIGPSGAGKSTFIKAIVGMQKLDSGNVKILERKIPDREVLGKLGYM AQEDALFKELTGKQNLEFFGSLQGIKKKDLQGKLDKAAATVNLTKQLNQSISNYSGGMQRRLSLAIALQTDAPILLLDEP TVGIDPELRQEIWEELRNQANQGKTILITTHVMDEAERCDVVLMLRNGKFIAEGSPKEIKEKYQVASVEEAFIVAGKNLE LQNKGAAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0094 | NP_763649.1 | ABC transporter ecsA-like protein | Not tested | SCCpbp4 | Protein | 3e-58 | 51 |
| SH0081 | YP_251996.1 | hypothetical protein | Not tested | SCCmec | Protein | 8e-48 | 50 |
| SH2613 | YP_254528.1 | hypothetical protein | Not tested | ¥ðSh2 | Protein | 1e-59 | 50 |
