Gene Information

Name : tra1077F (L0471)
Accession : NP_268232.1
Strain : Lactococcus lactis IL1403
Genome accession: NC_002662
Putative virulence/resistance : Unknown
Product : IS1077F transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2155831 - 2156649 bp
Length : 819 bp
Strand : -
Note : evidence experimental PMID:1328163; transposon related function; IS3/IS150/IS904 family transposase

DNA sequence :
TTGAAAGTTACAGGATTCCCTAAAGCCACTTATTATTATTGGGTTAACTGTTTTGAACGGGTAAACAAAGATGAGCTTAT
CGAAAAAGAAATGCTTAAAATACGTCAAGAACATGCCAATGCAGGTTATCGTCCAATGCGTGAATTACTTAAGCAACGTG
GCTATCACGTCAACCACAAGAAGGTACAGCGCTTAATGAAGAAGCTAGGGCTTCGTGTGACGTCTTATTGGCACAAATCA
CGTAAATATAATTCATATAAAGGAAAAGTAGGGACGGTAGCTAAAAATAAATTGCACAGACGATTCAGAACTTCCATTCC
TCATCAAAAAATCACAACAGATACGACAGAATTCAAATATTATGAAGATGGAATTCAGAAAAAGTGTTATCTCAATCCTT
ACATTGATTTATTTAATAGCGAGGTGATTAGTTATCATATCTCTAAACAACCCTCTTATCAATCAATTGATATTGCTCTA
AATCAAGCCTTAGCTGTGACATCTGATTGTCCTTATCGACGTACTTTCCACTCAGATCAAGGATGGGGATACCAGATGAG
AGACTATGTTTCTAAATTAAAATCTCATAGAATTTTTCAGTCTATGAGCCGTAAAGGAAACTGTCATGATAATTCAGTTA
TGGAGAATTTCTTTGGGCTACTTAAACAAGAAATTTACTACGGACATATCTTCTCGTCTTTCGAAGAACTTGAACAGGTT
ATTGTAATCTGGATTAGGTACTATAATACAAAACGAATCAAACAAAAATTGAACTGGATGAGTCCAATTCAATTTCGCTT
GAATTACCAAAACAATTAA

Protein sequence :
MKVTGFPKATYYYWVNCFERVNKDELIEKEMLKIRQEHANAGYRPMRELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKS
RKYNSYKGKVGTVAKNKLHRRFRTSIPHQKITTDTTEFKYYEDGIQKKCYLNPYIDLFNSEVISYHISKQPSYQSIDIAL
NQALAVTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRKGNCHDNSVMENFFGLLKQEIYYGHIFSSFEELEQV
IVIWIRYYNTKRIKQKLNWMSPIQFRLNYQNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 7e-48 46
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 1e-40 43
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 1e-40 43
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 7e-43 41