Gene Information

Name : yujD (L79717)
Accession : NP_268175.1
Strain : Lactococcus lactis IL1403
Genome accession: NC_002662
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2096283 - 2096909 bp
Length : 627 bp
Strand : -
Note : transport and binding protein

DNA sequence : 
ATGTTTGAATTAACTAATATTATAAAAGAATTTTTACATAGAAAGGTTTTTGATAACTTTAAATTAACCTTTGAAGCTGG
GAAAGTTTATGCCATTATTGGTCAATCAGGTTCTGGTAAAACAACCTTACTGAATATGATTGCTAAACTTGAATCCTACG
AAGGAAGTATTCTTTATGAGGGAAAAGAATTATCAAAAATCAAGAAACATTCCTATTTTCTAAATGATTTGTCTTATCTT
TTTCAAAATTTTGGATTGATTGAAAATGAAACGATTGATAAAAATTTGGATTTGGGATTGATTAATCACAAGTTATCCAA
GAAAACTAAACAAGAAAAAAAGCTTGAAACTCTGGCACAAGTTAATGTAGCCTATTTAAAACTCAATCAAAAAATTTATG
AATTGTCAGATGGTGAGGCACAGCGTGTAGCACTTGCTAAAGCGATTTTGAAAGATTCACCGGTTATTTTGGCGGATGAA
CCAACAGCAGCACTAGATTCTGAGAATAGTGAAGAAGTGATGAAACTGCTTTTGAGTATGAAAAATGAAAATCGGATTAT
TATTATCGCTACGCATAATCCTGTTATTTGGGAAATGGCAGATGAGGTTGTTGAATTGTCCAGATGA

Protein sequence : 
MFELTNIIKEFLHRKVFDNFKLTFEAGKVYAIIGQSGSGKTTLLNMIAKLESYEGSILYEGKELSKIKKHSYFLNDLSYL
FQNFGLIENETIDKNLDLGLINHKLSKKTKQEKKLETLAQVNVAYLKLNQKIYELSDGEAQRVALAKAILKDSPVILADE
PTAALDSENSEEVMKLLLSMKNENRIIIIATHNPVIWEMADEVVELSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 4e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yujD NP_268175.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-28 43
yujD NP_268175.1 ABC transporter ATP-binding protein CP003583.1.gene613.p Protein 9e-22 42