|
Name : agl (L128691) Accession : NP_267834.1 Strain : Lactococcus lactis IL1403 Genome accession: NC_002662 Putative virulence/resistance : Unknown Product : alpha-glucosidase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.20 Position : 1731220 - 1732857 bp Length : 1638 bp Strand : - Note : degradation of polysaccharides DNA sequence : ATGAAAAAAATAAAAACAAATGATTTTCACAAGATGGTAGGTTATCAGATTTATCCAAAATCATTCAAAGATACCAATGG AGATGGCATTGGCGACATCAATGGCATCATTGAAAAAATTCCTTATCTACGTGAATTGGGGATTGATTTTATCTGGATAA ATCCAATTTACAAGAGTCCACAAGTTGACGGGGGCTATGATATTTCTGATTATCAAGTCATTGATGAAATGTTTGGCTCA CTTGAAGATTTTAAAAAATTACTAGATAAAGCGCATGAAAATGGCTTGAAAGTCATCATGGATTTGGTAGTCAATCATAC ATCAGACCAACACCCTTGGTTTTTAGAAAGTCAAAAATCAAAAGATAATCCTTACCGTGATTATTATTTGTGGGAAGACG CTAGCCCTAACCAAATGCCAAATGATTGGATTTCCTTTTTTGGTGATTCAACTTGGGCTTATGATGAAAAAACAAAACAA GCTTATTTTCACGTTTTTGCCAAAGAGCAGCCTGATTTAAATTGGAAAAATCCCAAAGTCCGGCAAGAAATTTATGACAT GATTCGCTGGTGGTTAGATTTGGGAATAGATGGCTTCAGATTAGATGCGATTTCACACATTCAAAAAATGCCATGGAACT ATAAAATTAAATCTTGGAAAGGCGACGGCCCGTGGGTGCCTTTCATGAATGTTGCTGGGATTGAAACATATATGTCAGAT TTGAAAGCTATTTTTGATGAATATGGTGCTTTGACTGTTGGGGAAGCTTCAGGGGTTCGCTCCAAGCAAGCGCCCGATTG GACCGATGAAGCTGGCTATATCAATATGATTTTTGAATTAGAACATAATGTCAGAAAATCAAATGGCAATGGTCAGGGCA GTATTTATGGCTACAAAAAAGTCATTATGCGTTGGCAAGAAGATTTGCTTGAACGGGGTTGGAATGCTTTGTATATTGAA AATCATGACCAACCAAGAAGTATTGATACTTTTGGCGATGGTTCAATAGAATCAGCAAAAGCGTTGGCTGTCAGTTATAT GCTCTTAAGAGGAACGCCTTTCATATATCAAGGGCAGGAATTTGGGATGACTAATTTTCCATTTACTGACGCAAAGCAAT TGCGAGCTGACGAGATTAAAAAGAAATATGAAATGTTAATGACAGAACTGTCAGCAAATCAAGCACTAGCAGAAGTCACC CAAAATAGTCGTGAACACTCAAGAACACCAATGCAGTGGGACAATTCTAAAAATGCAGGATTTACAAGTGGACAAGCTTG GATGGAAATTAATCCAAATTTTTCTGTTATTAGTAGTCGAACTAATCAAGAACTCATTGAACTTTATAAAAAATTGATTG AATTACGGCATCAAGAACCAGCGATTTCAGAGGGTTCAATTAAATTTCATTTTAAAAGACATCCTCAAGTTTTAGTTTAT GAACGAGCTGAATTTTTAATTATTGTCAATTTGGCTGACAAAAAAGCTCATTTAGATTTTACAAAAATTGACAGTTTTAC TGACAGCTCTGCTGAAAGTTCTGTCATTAATTATCAACAAGTCTTGGGCAGTTCAAATCAAAAATTTCAAGAAAAAATGG TTCTGTCAGCCTGGGAATATCGGGTTTATAAAAAATAG Protein sequence : MKKIKTNDFHKMVGYQIYPKSFKDTNGDGIGDINGIIEKIPYLRELGIDFIWINPIYKSPQVDGGYDISDYQVIDEMFGS LEDFKKLLDKAHENGLKVIMDLVVNHTSDQHPWFLESQKSKDNPYRDYYLWEDASPNQMPNDWISFFGDSTWAYDEKTKQ AYFHVFAKEQPDLNWKNPKVRQEIYDMIRWWLDLGIDGFRLDAISHIQKMPWNYKIKSWKGDGPWVPFMNVAGIETYMSD LKAIFDEYGALTVGEASGVRSKQAPDWTDEAGYINMIFELEHNVRKSNGNGQGSIYGYKKVIMRWQEDLLERGWNALYIE NHDQPRSIDTFGDGSIESAKALAVSYMLLRGTPFIYQGQEFGMTNFPFTDAKQLRADEIKKKYEMLMTELSANQALAEVT QNSREHSRTPMQWDNSKNAGFTSGQAWMEINPNFSVISSRTNQELIELYKKLIELRHQEPAISEGSIKFHFKRHPQVLVY ERAEFLIIVNLADKKAHLDFTKIDSFTDSSAESSVINYQQVLGSSNQKFQEKMVLSAWEYRVYKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 6e-82 | 45 |
