|
Name : dexB (L124628) Accession : NP_267649.1 Strain : Lactococcus lactis IL1403 Genome accession: NC_002662 Putative virulence/resistance : Unknown Product : alpha 1-6-glucosidase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.70 Position : 1524880 - 1526427 bp Length : 1548 bp Strand : - Note : degradation of polysaccharides DNA sequence : ATGAATAATTGGTGGAAAAAAGCAGTCATTTATCAAATTTATCCCCGGTCATTTAAGGATTCAAATGATGACGGAATTGG TGACATCAATGGAATAATAGAGAAATTAACTTATCTTGAAAAACTAGGAGTGGATGGTATTTGGCTATCTCCGATTTATC AATCCCCGATGGTTGATAATGGTTATGACATTAGTGATTACTATAAAATTGACCCACTTTTTGGAACAATGGCTGATTTT GAAGCGCTCATAGAAAAAGCAAAGCAACTTAATATTCGTGTCATTATGGACTTGGTTGTCAATCATACTTCTGACCAACA TTTGTGGTTTAAAGAATCCAAAAAATCTAAAAATAATCCGAGAAGAGATTTTTATATTTGGCGGGATCAACCGATTGGAG AATTTAAAAATTGGACTTATGACTCAAGCACTCAACAATATTATTTTCATCTTTTTAGTCCACAGCAGCCTGACTTGAAT TGGGAAAATGAAGAAGTGCGTAAGGAAATTCATAAGATGATGAATTTTTGGTTGGCTAAGGGAATTTCTGGTTTTAGATT AGATGTCATTGATTTGATTGGAAAAAAACCAGAACAAGAAATCACGGTTAATGGTCCAAAACTGCATGATTACCTAAAAG AGATGAATTTAGCAACTTTTGGTAAAAAGGACTATCTCACTGTTGGTGAAGCTTGGTCAAGTTCACCAGAATTAGCAAAG TTATATAGTGGCCCCAATCGTCATGAACTTTCAATGGTTTTTGGCTTCTGGCATCTATTGACATCAGCAGGAAACGGGGA CAAATGGAAAAAACTCCCCTTAAATGTTCCAAAGCTAAAAGAAGCAATGACCGCTTGGCAGAAATTGACGCCAAATGAAG CATGGAATTCTCTTTTTCTAGGCAATCATGATTTGCCACGCATTGTCTCTTTTTGGGGAGATGAGGGAACATACAGAGAA AAATCAGCCAAAGCTTTTGCAATTCTCTTTCATTTGATGCGTGGCACTTCTTTTATTTATCAAGGCGAAGAATTAGGAAT GACCAATTTTCCTTTTGAAAATCTGTCAGCAATAAATGACGTAGAATCACATGAATATTTTACTGACAGAAAAAAAGAAG GACAGTCAGAAGAAGAAATTATCAAAGTTTTGCGAGAAATGAGTCGTGATAATGCTAGGACGCCAATGCAATGGACCAGT GATGAGAAAGCTGGTTTTACAAAAGGGAAAGCTTGGCTTTCTATCAATCCTAATACTAAGATAATAAATGCTGACCAAGC TGTCAGTGATTCTAACTCTGTATTTTATACTTATCAAAAGTTAATCAAACTTCGTCACCAAGAAAATTGGCTGATAGAAG GAGATTTTGAATTACTTGAAAGTGCTGACGAAATCTTCGCATACTTGAGAAAAACGACAACAAGAACTTTTCTGGTGGTC GCCAACTTATCAAATTCAAGTCAACGTTTTGAAAGTTCTTTTGTCAAAAAAAATGAAATCATCAGTAATGACAGCTTTCC AGATTTACTGACAGACATAGAAATTTAA Protein sequence : MNNWWKKAVIYQIYPRSFKDSNDDGIGDINGIIEKLTYLEKLGVDGIWLSPIYQSPMVDNGYDISDYYKIDPLFGTMADF EALIEKAKQLNIRVIMDLVVNHTSDQHLWFKESKKSKNNPRRDFYIWRDQPIGEFKNWTYDSSTQQYYFHLFSPQQPDLN WENEEVRKEIHKMMNFWLAKGISGFRLDVIDLIGKKPEQEITVNGPKLHDYLKEMNLATFGKKDYLTVGEAWSSSPELAK LYSGPNRHELSMVFGFWHLLTSAGNGDKWKKLPLNVPKLKEAMTAWQKLTPNEAWNSLFLGNHDLPRIVSFWGDEGTYRE KSAKAFAILFHLMRGTSFIYQGEELGMTNFPFENLSAINDVESHEYFTDRKKEGQSEEEIIKVLREMSRDNARTPMQWTS DEKAGFTKGKAWLSINPNTKIINADQAVSDSNSVFYTYQKLIKLRHQENWLIEGDFELLESADEIFAYLRKTTTRTFLVV ANLSNSSQRFESSFVKKNEIISNDSFPDLLTDIEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 6e-100 | 46 |
