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Name : busAB (L72477) Accession : NP_267607.1 Strain : Lactococcus lactis IL1403 Genome accession: NC_002662 Putative virulence/resistance : Unknown Product : betaine ABC transporter permease and substrate binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4176 EC number : - Position : 1472729 - 1474450 bp Length : 1722 bp Strand : - Note : evidence experimental PMID:10515910; transport and binding protein; amino acids, peptides and amines. involved in osmoprotection. Permease and substrate binding functions are in the same protein DNA sequence : ATGATTGATTTAGCTATTGGACAAGTACCCATAGCAAACTGGGTGTCATCGGCAACAGATTGGATTACTAGTACTTTTAG TTCAGGATTTGATGTGATTCAAAAATCAGGAACGGTATTGATGAACGGTATTACAGGTGCTTTAACTGCTGTTCCATTCT GGTTGATGATTGCTGTTGTTACTATCCTTGCCATTTTGGTTTCAGGTAAAAAAATTGCCTTTCCTTTATTCACTTTCATC GGTCTTTCTTTAATTGCTAACCAGGGCTTATGGTCAGATTTGATGAGTACAATCACACTTGTCTTACTTTCAAGTTTATT GTCAATCATCATTGGAGTTCCTTTAGGGATTTGGATGGCCAAATCTGATTTAGTGGCTAAGATCGTTCAACCGATTTTGG ACTTTATGCAAACGATGCCTGGTTTCGTTTATTTGATTCCAGCGGTTGCATTCTTTGGAATAGGAGTTGTTCCTGGGGTA TTTGCATCTGTTATCTTTGCACTCCCACCAACAGTCAGAATGACTAACTTGGGAATTCGTCAAGTTTCAACGGAATTAGT TGAAGCGGCAGATTCATTTGGTTCAACTGCCCGTCAAAAGCTTTTTAAATTGGAATTTCCTTTGGCTAAAGGAACAATTA TGGCTGGTGTTAACCAAACGATTATGTTAGCTCTTTCTATGGTTGTTATCGCTTCTATGATTGGGGCGCCTGGCTTAGGT CGTGGTGTACTTGCAGCTGTTCAATCGGCTGATATTGGTAAAGGGTTTGTAAGTGGGATTTCATTAGTTATTTTGGCTAT TATTATTGACCGCTTTACACAAAAACTTAATGTTTCTCCTCTTGAAAAACAGGGAAATCCTACAGTTAAAAAATGGAAAC GTGGAATTGCCTTAGTTTCATTGTTAGCTTTAATTATTGGTGCCTTTTCAGGAATGTCTTTTGGGAAAACAGCCTCTGAT AAAAAAGTTGACTTAGTTTATATGAACTGGGATTCAGAAGTTGCATCAATCAATGTTTTGACTCAAGCGATGAAAGAACA CGGCTTTGATGTTAAAACGACAGCTTTAGATAATGCGGTGGCTTGGCAAACAGTAGCCAATGGTCAAGCAGATGGAATGG TTTCTGCTTGGTTACCAAACACGCATAAAACACAATGGCAAAAATATGGTAAATCTGTTGATTTGTTAGGTCCTAACCTT AAAGGGGCTAAAGTTGGGTTTGTTGTTCCAAGTTATATGAATGTTAATTCAATTGAAGATTTAACAAATCAAGCGAATAA AACAATCACAGGTATTGAACCAGGTGCAGGTGTAATGGCTGCTAGTGAAAAAACGCTTAATAGCTATGATAATCTTAAAG ATTGGAAACTTGTTCCTTCATCATCAGGTGCAATGACTGTAGCTCTTGGTGAAGCAATCAAACAACATAAAGATATTGTC ATTACTGGTTGGTCTCCTCATTGGATGTTTAACAAATATGATTTGAAATATTTGGCTGATCCAAAAGGAACAATGGGAAC TTCAGAAAATATTAATACCATTGTTCGTAAAGGTTTGAAGAAAGAAAATCCAGAAGCTTATAAAGTTTTAGATAAATTTA ATTGGACAACTAAGGATATGGAAGCTGTCATGCTTGATATTCAAAATGGTAAAACACCAGAAGAAGCTGCCAAAAATTGG ATTAAAGATCATCAAAAAGAAGTTGATAAATGGTTTAAATAA Protein sequence : MIDLAIGQVPIANWVSSATDWITSTFSSGFDVIQKSGTVLMNGITGALTAVPFWLMIAVVTILAILVSGKKIAFPLFTFI GLSLIANQGLWSDLMSTITLVLLSSLLSIIIGVPLGIWMAKSDLVAKIVQPILDFMQTMPGFVYLIPAVAFFGIGVVPGV FASVIFALPPTVRMTNLGIRQVSTELVEAADSFGSTARQKLFKLEFPLAKGTIMAGVNQTIMLALSMVVIASMIGAPGLG RGVLAAVQSADIGKGFVSGISLVILAIIIDRFTQKLNVSPLEKQGNPTVKKWKRGIALVSLLALIIGAFSGMSFGKTASD KKVDLVYMNWDSEVASINVLTQAMKEHGFDVKTTALDNAVAWQTVANGQADGMVSAWLPNTHKTQWQKYGKSVDLLGPNL KGAKVGFVVPSYMNVNSIEDLTNQANKTITGIEPGAGVMAASEKTLNSYDNLKDWKLVPSSSGAMTVALGEAIKQHKDIV ITGWSPHWMFNKYDLKYLADPKGTMGTSENINTIVRKGLKKENPEAYKVLDKFNWTTKDMEAVMLDIQNGKTPEEAAKNW IKDHQKEVDKWFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuABC | YP_281522.1 | glycine betaine-binding protein/glycine betaine transporter permease | Not tested | Not named | Protein | 9e-152 | 60 |
