Gene Information

Name : yabE (L15262)
Accession : NP_266166.1
Strain : Lactococcus lactis IL1403
Genome accession: NC_002662
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 15274 - 15909 bp
Length : 636 bp
Strand : +
Note : transport and binding protein

DNA sequence : 
ATGATTGAGATTGAAGAACTGACAAAAAGTTACAAAGGGCATATTATTTTTGATAAATTAAATTTAAGAATTCCGGAAGG
AAAAATGACCGCAATTTATGGGACAAGTGGTGCGGGAAAGTCAACACTTTTGAATATTATTGGTTTAATTGAGGATTATG
ATGATGGGAAATATTATTTTAACGGTCAGTTTGCACCACCTTTTAATAGTTCCTTAGCTTTAAAGATGAGGAGAAATAAA
ATTTCCTATCTTTTTCAAAACTTTGCTTTATTAGAAGATGAAACAATCGAAAAAAATTTAGAGATAGCACTGATTTATTC
TAGAATTTCAAAAAAAGAAAAACGAAAAAAGATGAAGAAATTGTTACTCCAAGTAGGCATAAATCATCGATTAAATACAA
AAGTTTATAGTCTTTCTGGTGGAGAGAAACAAAGAGTAGCAATTGCACGGGCTTTATTAAAAGAAAGTCAGCTGATTTTG
GCAGATGAACCAACAGGTTCGCTTGATACAGAAAATAGAAATGAAGTGATTGCTCTTTTGCGTCAAGAAGTTGATAAGGG
AAAGGCGGTTGTCATTGTGACACATGATTCTTACCTGAAAGAAGTTAGTGATTTGGTTATTGAGATTGGTGAATAA

Protein sequence : 
MIEIEELTKSYKGHIIFDKLNLRIPEGKMTAIYGTSGAGKSTLLNIIGLIEDYDDGKYYFNGQFAPPFNSSLALKMRRNK
ISYLFQNFALLEDETIEKNLEIALIYSRISKKEKRKKMKKLLLQVGINHRLNTKVYSLSGGEKQRVAIARALLKESQLIL
ADEPTGSLDTENRNEVIALLRQEVDKGKAVVIVTHDSYLKEVSDLVIEIGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-36 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yabE NP_266166.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 3e-39 53
yabE NP_266166.1 ABC transporter ATP-binding protein CP003583.1.gene613.p Protein 8e-35 47
yabE NP_266166.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-27 41