Gene Information

Name : ycbR (Z1287)
Accession : NP_286814.1
Strain : Escherichia coli EDL933
Genome accession: NC_002655
Putative virulence/resistance : Virulence
Product : chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1217185 - 1217886 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGTTCGTCCACATGGGCGGC
AGGTAAAGGCGGGGTTGGACTTGCAGCAACACGTCTTGTTTATTCGGAAGGTGAAGAGCAAATTTCACTGGGTGTACGTA
ACACCAGTCCGGATGTTCCTTATCTGATTCAGTCATGGGTGATGACCCCAGATAATAAAAAATCAGCGGACTTTATTATT
ACACCACCGCTATTTGTGCTGAATCCGGCAAACGAGAATCTGTTACGCATTATGTACATTGGCGCGCCGTTGGCGAAAGA
CAGAGAAACTCTTTTCTTCACTAGCGTACGGGCAGTCCCTTCAACAACGAAGCGGGAAGAAGGCAATACCCTGAAGATTG
CCACACAAAGCGTCATCAAACTTTTCTGGCGACCAAAAGGTTTAGCGTATCCCTTAGGCGAGGCTCCGGCGAAACTGCGT
TGCACTTCGTCAGCTGACATGGTTACGGTCAGTAACCCAACACCTTATTTCATTACCCTGACAGACCTGAAAATAGGTGG
AAAGTTAGTTAAAAATCAAATGATTTCCCCCTTTGATAAATACCAATTCTCTCTGCCAAAGGGTGCCAAAAATAGCAGCG
TAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAA

Protein sequence : 
MKTCITKGIVTVSLTAILLSCSSTWAAGKGGVGLAATRLVYSEGEEQISLGVRNTSPDVPYLIQSWVMTPDNKKSADFII
TPPLFVLNPANENLLRIMYIGAPLAKDRETLFFTSVRAVPSTTKREEGNTLKIATQSVIKLFWRPKGLAYPLGEAPAKLR
CTSSADMVTVSNPTPYFITLTDLKIGGKLVKNQMISPFDKYQFSLPKGAKNSSVTYRTINDYGAETPQLNCKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-38 45
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 4e-37 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ycbR NP_286814.1 chaperone VFG0911 Protein 2e-37 45
ycbR NP_286814.1 chaperone VFG1644 Protein 3e-37 45
ycbR NP_286814.1 chaperone VFG0875 Protein 2e-38 45
ycbR NP_286814.1 chaperone VFG0445 Protein 1e-37 42