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Name : TC_0090 (TC_0090) Accession : NP_296474.1 Strain : Chlamydia muridarum Nigg Genome accession: NC_002620 Putative virulence/resistance : Virulence Product : virulence ATPase, putative Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : - Position : 108587 - 109891 bp Length : 1305 bp Strand : - Note : identified by match to PFAM protein family HMM PF01966 DNA sequence : ATGATTCATCTTCAACAAGAAACTTTATTGATCCATCAATGGCGTCCTTATCGAGAGTGTGGGATTTTATCACGCATATC AGGGGATCTTCTGGAAGCTCAAGGACTATCTGCATGCTTGGGAGAGCTCTGTCAAATTTCTCTCCCCCGCTCTTCCCCTA TTCTTGCAGAAGTTATTGGCATTCATAATCAAACAACACTATTACTAGCACTTACTCCGATTTACTCTCTCTCTCTTGGA GCAGAAGTTGTTCCCTTACGTAGACCAGCTTCGCTCCCTCTTTCCCACCACCTTCTTGGAAGAGTCATTGATGGATTCGG TAACCCTCTGGATGGGAATCCTCCCCTACCTAAATCTCATCTCTCTCCGCTATTCTCCCCCCCTCCTTCTCCTATGTCGC GCACCCCTATACAAGAAATATTCCCTACAGGAATCCGAGCGATTGACGCTCTACTCACCATAGGGGAAGGACAACGCGTA GGAATCTTTTCAGAACCTGGCGGAGGTAAATCCTCTCTCTTATCTACGATAGCAAAGGGTTCTCAACAAACCATTAATGT GATTGCTCTTATAGGAGAACGTGGCAGAGAAGTCCGAGATTATGTCAACCAACACAAAGAAGGCCTAGCAGCTCAACGTA CAATTATTGTTGTTTCCACTGCCCATGAAACAGCCGCTAGCAAAGTCATTGCAGGTCGGGCTGCTATAACCATTGCAGAA TATTTCCGGGATCAAGGAGCCCGGGTATTATTTATTATGGATTCTTTATCTAGGTGGATAGAGTCTCTTCAAGAGGTAGC TCTTGCTAGAGGAGAAACACTTTCTACACATCATTACGCAGCATCAGTTTTTCACCATGTTTCAGAATTCTTAGAGCGAG CAGGGAACAATGATAAAGGATCTATCACATCTTTTTATGCTATGTTGCATTATGCAAACCACCCCGACATTTTTAATGAT TATGTTAAATCTCTTCTAGATGGACATTTCTTCCTCTCCCCTGTGGAAAAAAGCTTCTTTTCTCCTCCTATTAATCTGTT AACGAGTCTTTCTAGATCAGCTTGTCAACTAGCGCTTCCTCACCACTATGCCGCTGCTCAAGAACTCCTTTCTCTGCTAA AAGCTTACCATGAAGCTATTGATATCATTCAGTTAGGAGCATATGTCTCCGGACAGGATGCTAAACTTGATCGAGCGATT CGCCTTCTTCCATCATTACGAGAATTTTTATCCCAACCTCTTTCTAACTACTCTGATATTCACGACACAATCGAACAACT CTGCTTGTTGTTAAAACATGAATAA Protein sequence : MIHLQQETLLIHQWRPYRECGILSRISGDLLEAQGLSACLGELCQISLPRSSPILAEVIGIHNQTTLLLALTPIYSLSLG AEVVPLRRPASLPLSHHLLGRVIDGFGNPLDGNPPLPKSHLSPLFSPPPSPMSRTPIQEIFPTGIRAIDALLTIGEGQRV GIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTIIVVSTAHETAASKVIAGRAAITIAE YFRDQGARVLFIMDSLSRWIESLQEVALARGETLSTHHYAASVFHHVSEFLERAGNNDKGSITSFYAMLHYANHPDIFND YVKSLLDGHFFLSPVEKSFFSPPINLLTSLSRSACQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQDAKLDRAI RLLPSLREFLSQPLSNYSDIHDTIEQLCLLLKHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 2e-55 | 42 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 1e-55 | 42 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 1e-55 | 42 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 1e-55 | 42 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 1e-55 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TC_0090 | NP_296474.1 | virulence ATPase, putative | VFG0515 | Protein | 6e-56 | 42 |
