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Name : gspE (TC_0860) Accession : NP_297233.1 Strain : Chlamydia muridarum Nigg Genome accession: NC_002620 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 993620 - 995122 bp Length : 1503 bp Strand : - Note : identified by match to PFAM protein family HMM PF03205 DNA sequence : ATGGCCGAGAATAAGTGTTCCATGCAAGATCTTTTAGATCGCCTTCCTTACTCCTTTTTAAAGAAAAATTATCTGCTGCC TATAGATGACTTAGGGGATAAGATCGTATTGGCGAGGCATCTGAAAAAGACTCCTTTGGAGGCTTTGGATGAAGTGCGGT TGATTATGCAGAAACCCCTTACCATAGTTTCTAAGGAAGAAACAGAAATTATTCACGGATTGCAAAAGCTTTATAGCGAT AAGGAGGGGAAGGCCTCTGAAATGCTACTCTCTATGCAAGATGGAGAGGCTCAAGAATCTGAAAGTGACACGACTGAACT TCTTGAGAGCCAAGAGGATAGTGCGCCTGTTGTTCGATTACTAAATTTGATTCTTAAAGAAGCTATTGAAGAGCGGGCTT CGGATATTCATTTTGAGCCAGTAGAGGATCTACTGCGTATTCGTTACCGTATTGATGGGGTTCTTCATGATCGTCATGCT CCTCCCAATCATCTCAGAACGGCTCTCATTACTCGTATTAAGGTGTTGGCTAAACTTGACATAGCCGAACATCGTTTACC TCAAGATGGGCGCATTAAGTTGCAGTTGGGGGGGCAAGAGATTGATATGCGTGTCAGTACAGTCCCTGTGATTCATGGGG AACGGGTAGTATTGCGTATATTAGATAAGCGTAATGTGATTTTGGACATACGAGGGTTGTGTATGCTTCCCAAAATGGAA GCTTCTTTTAGAAAAGCAATTAGTGTCCCTGAAGGTATTTTGTTGGTTACAGGTCCTACAGGAAGCGGGAAGACCACAAC GTTATATAGTGTTTTACAACATCTGTCCGGGCCTTTTACGAATATTATGACTATTGAAGATCCTCCGGAGTATAAGCTCC CTGGGATTGCTCAAATTGCTGTAAAACCTAAGATAGGGCTTACCTTTTCCAGAGGGCTTCGTCATTTGTTAAGGCAGGAT CCGGATGTTCTTATGGTTGGAGAAATTCGTGATCAAGAAACTGCAGAGATTGCAATTCAAGCAGCTTTAACAGGGCATTT AGTTGTTACTACTCTTCATACTAATGATGCTGTATCCGCGATACCACGTCTTTTAGATATGGGGGTCGAGTCTTATTTAT TGTCTGCAACCATGATAGGAGCTGTTGCTCAACGACTAGTTCGTAGGATTTGCAAGCATTGTAAAGAAATATGTGAAGCA GATGTACAAGAACGAGCTTTGCTAAAGGCGTTAGGAAAAGACCCTTATGCTCCTTTGTATAAAGGTCGCGGGTGTTCCCA ATGTTTTCGTTCAGGATACAAAGGGAGACAGGGGATTTATGAGTTTGTCGATATTACGACGACCCTTCGCTCTGAAATTG CATTAGGGAAGCCTTATCATGTTTTGCGAGGCGTAGCAGAGCAAGAGGGATATCGGCCTTTGCTTGAGCATGGAGTAGAA CTAGCTCTTGCAGGAGAGACGACTCTCTCTGAAGTTTTACGTGTCGCTAAACGGTCAGAATAG Protein sequence : MAENKCSMQDLLDRLPYSFLKKNYLLPIDDLGDKIVLARHLKKTPLEALDEVRLIMQKPLTIVSKEETEIIHGLQKLYSD KEGKASEMLLSMQDGEAQESESDTTELLESQEDSAPVVRLLNLILKEAIEERASDIHFEPVEDLLRIRYRIDGVLHDRHA PPNHLRTALITRIKVLAKLDIAEHRLPQDGRIKLQLGGQEIDMRVSTVPVIHGERVVLRILDKRNVILDIRGLCMLPKME ASFRKAISVPEGILLVTGPTGSGKTTTLYSVLQHLSGPFTNIMTIEDPPEYKLPGIAQIAVKPKIGLTFSRGLRHLLRQD PDVLMVGEIRDQETAEIAIQAALTGHLVVTTLHTNDAVSAIPRLLDMGVESYLLSATMIGAVAQRLVRRICKHCKEICEA DVQERALLKALGKDPYAPLYKGRGCSQCFRSGYKGRQGIYEFVDITTTLRSEIALGKPYHVLRGVAEQEGYRPLLEHGVE LALAGETTLSEVLRVAKRSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-86 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-86 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | NP_297233.1 | general secretion pathway protein E | VFG0182 | Protein | 1e-83 | 54 |
| gspE | NP_297233.1 | general secretion pathway protein E | VFG2426 | Protein | 6e-65 | 47 |
| gspE | NP_297233.1 | general secretion pathway protein E | VFG1876 | Protein | 5e-89 | 46 |
| gspE | NP_297233.1 | general secretion pathway protein E | VFG2048 | Protein | 2e-86 | 46 |
