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Name : clpC (TC_0559) Accession : NP_296935.1 Strain : Chlamydia muridarum Nigg Genome accession: NC_002620 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 668059 - 670671 bp Length : 2613 bp Strand : + Note : similar to SP:P32670, GB:U00006, PID:409787, GB:U00096, and PID:1790383; identified by sequence similarity; putative DNA sequence : ATGTCGTATATGCTGAAGAGTATTCCACCTCGCCATATTCAGGTTTTTATGTTTGAGAAGTTTACCAATCGCGCAAAGCA AGTGATTAAGTTGGCGAAAAAAGAAGCTCAACGACTCAATCACAACTATCTAGGAACCGAGCACATCTTATTGGGATTAC TAAAACTAGGCCAAGGAGTGGCTGTTAATGTATTACGCACTCTTGGCGTTGACTTCGACACAGCAAAAAACGAAGTAGAA AGACTCATTGGGTATGGACCGGAGATCCAAGTGTATGGAGATCCAGCTCTAACAGGTAGAGTGAAAAAATCTTTTGAATC AGCTAATGAAGAAGCCTCTATTTTAGAACACAACTATGTCGGAACAGAACATCTTTTACTCGGAATTCTCAATCAAGCTG ATGGTGTGGCTCTGCAAGTTTTAGAAAACTTGCATATAGATCCTAAAGAAATCCGAAAGGAAATTTTAAAAGAGCTAGAA ACGTTTAATTTGCAGCTCCCTCCTTCTTCCTCTATTACCCCAAGAAACACGAATAGTTCTTCGTCTTCCTCTTCAAAATC TTCTTCTTTAGGAGGACATTCTTTAGGTGGGGATAAACCTGAAAAGCTTTCCGCTCTCAAAGCGTATGGATATGACCTAA CAGAAATGTTCAAAGAGGCTCGTCTAGATCCCGTTATTGGTCGATCTGCAGAAGTCGAACGATTAATTTTGATCCTTTGT CGTCGTAGAAAAAACAACCCAGTTTTAATTGGAGAAGCTGGTGTAGGTAAAACAGCTATCGTTGAAGGATTAGCCCAAAA AATTGTCTCTGGAGAAGTTCCTGAAGCTCTTCGTAAAAAACGATTGATCACCTTAGATTTGGCTCTGATGATAGCTGGAA CCAAATATCGAGGTCAATTTGAAGAACGAATCAAAGCAGTTATGGATGAAGTCCGTAAGCATGGCAATATTCTTCTTTTC ATTGATGAGCTTCACACCATTGTTGGCGCAGGGGCTGCTGAAGGAGCGATAGATGCTTCCCATATTTTGAAACCAGCCTT AGCTCGTGGAGAAATTCAGTGCATAGGGGCTACAACTCTAGATGAATATCGAAAACACATTGAAAAAGATGCTGCTTTGG AACGTCGATTCCAAAAAATTGTTGTTCAACCACCCAGTGTTGATGAGACTGTAGAAATTCTTAGAGGCCTGAAGAAAAAA TATGAAGAGCATCATAATGTCTTCATCACCGATGAAGCTCTCGTTGCTGCTGCTAAACTATCCGACCAATACGTTCACGG TCGCTTTCTTCCCGACAAAGCTATTGACCTTTTAGATGAAGCTGGAGCTCGTGTACGTGTCAATACAATGGGGCAACCTT CGGAGCTTTTACGTTTAGAAGCTGAAATAGAAAGCACCAAACAGGCTAAAGAACAGGCTATAGGAACTCAAGAATATGAG AAAGCTGCCAGCCTTCGTGATGAAGAGAAAAAGCTTAGAGAAAAACTAAGCAACATGAAACAACAGTGGGAATCAAATAA AGAAGAACATCAAGTTCCTGTTGATGAGGAAGCTGTTGCTCAAGTGGTTTCAGTACAAACTGGTATTCCTGCGGCTCGCT TAACAGAAGCAGAAAGCGAAAAATTATTAATGCTAGAGAATACTCTACAAAAGAAAGTAATTGGCCAAGATCAAGCTGTT GCTAGTATTTGTCGAGCTATTCGTCGTTCAAGAACTGGCATTAAAGATCCTAATAGACCTATGGGATCCTTCCTATTTCT AGGTCCTACTGGAGTTGGGAAAACTTTGCTAGCTCAACAAATTGCTGTTGAAATGTTTGGAGGAGAAGATTCTCTTATCC AAGTAGATATGTCCGAATATATGGAGAAGTTTGCTGCGACCAAAATGATGGGATCTCCTCCAGGATATGTAGGTCACGAA GAAGGCGGACATTTGACAGAACAGGTTCGCCGTCGCCCTTATTGTGTTGTTCTCTTTGATGAAATTGAGAAAGCTCATCC AGATATTATGGATCTTATGTTGCAGATTCTTGAACAGGGCCGTCTAACGGATTCCTTTGGACGCAAGATTGATTTCCGTA ATACCATTATTATTATGACTTCCAATTTGGGAGCTGATTTAATTCGGAAGACTGGAGAGATAGGTTTTGGTCTTCGTTCC CATATGGATTATGGAGTGATCAAAGAGAAAATAGATGCTGCAGTCAAAAAGCATCTAAAACCAGAATTTATCAACCGTCT AGATGAAAGTGTTATCTTTAAACCTCTTGAGAAGGAAGCCCTTTCTGAAATTATTCATCTAGAAATTAATAAACTGGGAT CTCGTCTACAAAACCACCAAATGGCTCTTAATATTCCTGATTCGGTGGTCTCATTCTTGGTAGATAAAGGACATTCTCCA GAAATGGGCGCCCGACCATTAAGACGTGTAGTGGAGCAGTACTTGGAAGATCCTTTAGCAGAGATGCTATTGAAAGAGTC GTGCCGACAAGAAGCAAGAAAATTATGCGCTCGCCTAATAGAAGAGCGTGTTATTTTCGAGCGGGAAGACGAAATTTCTG CTTTAGCTGTAGAGGGGGATGGCCCCGCCTCTGTTACAGCTGATGAATCATAG Protein sequence : MSYMLKSIPPRHIQVFMFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAKNEVE RLIGYGPEIQVYGDPALTGRVKKSFESANEEASILEHNYVGTEHLLLGILNQADGVALQVLENLHIDPKEIRKEILKELE TFNLQLPPSSSITPRNTNSSSSSSSKSSSLGGHSLGGDKPEKLSALKAYGYDLTEMFKEARLDPVIGRSAEVERLILILC RRRKNNPVLIGEAGVGKTAIVEGLAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLF IDELHTIVGAGAAEGAIDASHILKPALARGEIQCIGATTLDEYRKHIEKDAALERRFQKIVVQPPSVDETVEILRGLKKK YEEHHNVFITDEALVAAAKLSDQYVHGRFLPDKAIDLLDEAGARVRVNTMGQPSELLRLEAEIESTKQAKEQAIGTQEYE KAASLRDEEKKLREKLSNMKQQWESNKEEHQVPVDEEAVAQVVSVQTGIPAARLTEAESEKLLMLENTLQKKVIGQDQAV ASICRAIRRSRTGIKDPNRPMGSFLFLGPTGVGKTLLAQQIAVEMFGGEDSLIQVDMSEYMEKFAATKMMGSPPGYVGHE EGGHLTEQVRRRPYCVVLFDEIEKAHPDIMDLMLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGADLIRKTGEIGFGLRS HMDYGVIKEKIDAAVKKHLKPEFINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNHQMALNIPDSVVSFLVDKGHSP EMGARPLRRVVEQYLEDPLAEMLLKESCRQEARKLCARLIEERVIFEREDEISALAVEGDGPASVTADES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-177 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | NP_296935.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 51 |
| clpC | NP_296935.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0080 | Protein | 6e-148 | 49 |
