Gene Information

Name : TC_0339 (TC_0339)
Accession : NP_296718.1
Strain : Chlamydia muridarum Nigg
Genome accession: NC_002620
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 401822 - 402601 bp
Length : 780 bp
Strand : +
Note : similar to GB:U00014, and PID:466912; identified by sequence similarity; putative

DNA sequence :
TTGAATAGGGATAATACGATTGCTTGGGCTGTAGATGATCTGTGTGTTAACTATGATCACTCAGACGTTTTATGCCATAT
TGCCTTTTCTTTGCCTTCTGGGGCGATGGCGGCTATAATTGGCCCTAACGGGGCAGGGAAGAGTACTCTACTTAAGGCCT
CCTTAGGCCTGATTCGTGCCTCTTCAGGCCAAAGCTTGTTCTTTGGCCAAAAATTTGCTAAAGTGCATCAAAGAATAGCA
TATATGCCTCAAAGAGCTAGTGTGGATTGGGATTTTCCAATGACTGTTCTTGACCTCGTATTAATGGGGTGTTACGGCTA
CAAAGGTATGTGGAATCGTATTTCTACAGGTGATCGTCGCGAGGCTATGAATATTTTAGAACGAGTTGGGTTGGCAGATT
TTGCAAATAGGCAGATTGGGAAGCTTTCTGGTGGACAGCAACAAAGAGCTTTTTTAGCGCGCTCATTAATGCAAAAAGCT
GATTTATACCTTATGGACGAGCTTTTCTCAGCTATCGATATGGCTTCCTATCGTATGGTAGTAGATGTTTTACAGGATCT
AAAAAAAGAAGGTAAAACTATCGTAGTCATTCATCATGACTTGAGTAATGTTCGGCAGCTATTTGATCATGTTATTTTAT
TAAATAAACATCTTGTGTGCTCTGGCAGTGTAGAAAAATGCCTGACAAAAGAAGCTATTTTTCAGGCTTATGGGTGTGAA
CTTGAGCTTTTAGATTACACACTTAAGTTGTCTAGGGGAAAGTATCAAGGATCATGTTAG

Protein sequence :
MNRDNTIAWAVDDLCVNYDHSDVLCHIAFSLPSGAMAAIIGPNGAGKSTLLKASLGLIRASSGQSLFFGQKFAKVHQRIA
YMPQRASVDWDFPMTVLDLVLMGCYGYKGMWNRISTGDRREAMNILERVGLADFANRQIGKLSGGQQQRAFLARSLMQKA
DLYLMDELFSAIDMASYRMVVDVLQDLKKEGKTIVVIHHDLSNVRQLFDHVILLNKHLVCSGSVEKCLTKEAIFQAYGCE
LELLDYTLKLSRGKYQGSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 4e-40 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 3e-40 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TC_0339 NP_296718.1 ABC transporter, ATP-binding protein BAC0400 Protein 4e-52 51