Gene Information

Name : ribG (TC_0103)
Accession : NP_296487.1
Strain : Chlamydia muridarum Nigg
Genome accession: NC_002620
Putative virulence/resistance : Unknown
Product : riboflavin-specific deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : -
Position : 121759 - 122949 bp
Length : 1191 bp
Strand : +
Note : identified by match to TIGR protein family HMM TIGR01508

DNA sequence :
TTGGTTCCTTGCGTATTAATCGTATATCCAACATCCTTGCATCTCTTTCGCTATCTGATTTTTCAGGTTGAGTATATGGA
AGTTTCGTCTGAGCAACAACTGTTTTTTATGCGCGAGGCCGTTGCATTAGGTGAAAGGGGGAGGATTTTTGCTCCCCCTA
ATCCTTGGGTGGGGTGTGTGATTGTAAAAAATGGATGTATAATAGGAAGAGGGTGGCACAAAGGAATTGGGTCCCCGCAT
GCGGAAGTTTGTGCTTTCCAAGATCAAACTAGCTCATTGGTAGGAGCAGATGTGTATGTCACCTTAGAGCCTTGCTGCCA
TTTTGGTAGGACTCCCCCCTGCGTAGATCTTTTGATCAAAAGTAAGGTGTCGTCAGTTTATATTGCTCTGCTAGATCCTG
ACCCTCGTGTTTGTAAAAGGGGGGTTGCTCGTCTGAAGGAGGCGGGAATTTCTGTTTATGTGGGGATAGGTCACGAAGAA
GCAAAGGCTTCCTTGCAACCGTACTTGCATCAAAGAGAAACGGGGTTGCCATGGGTTGTTATGAAAACGGCCGCGTCTCT
CGATGGTCAAACCTCGGATCGTAGAGGGATATCGCAATGGATTTCAGGAGAGCAGGCTCGGTTAGATGTAGGAAGACTTC
GTGCTGAGTCCCAAGCTGTAATTGTCGGTTCGCGTACGGTGTGTTTAGATAATCCTCGTTTATCTGCTCGGATGCCTTCA
GGGGATTTGTACGAGAGACAACCGTTACGAGTAGTGGTGGATAGCAGAGGGAGTGTTCCTTTAGATGCTCGGGTATGGAA
TCCAGATTCTGGAAATGTTTTGCTTGCTACAACGGAACAGTGCTCTAAGGAGCATATTCAAAAATTAGAAGATCGGGGAG
TGGAGGTATGGAAATCTTCTCCCCAGCAGGTGGATCTCAAAAGACTTTTACAATATCTGGCAGAGAAAGGATGTCTACAA
GTGCTTGTTGAAGGGGGGGCTCGGTTGCACTCCGCTTTCTGGCGTGAGCATCTTGTGAACGCAGGTGTGATCTATTGGGG
CCCCAAATTTTTGGGGGATCAAGGTAGTCCTATGTTACGAGATCTTCAGTTATGTTTGGATAATGCAGAACATGTGAAAA
TCACAAAAACTTTTTTAGTTGGAGATTCTGTAAAGACATGTTTTGAATGCGTGGGGAGAGAGGATGGATAG

Protein sequence :
MVPCVLIVYPTSLHLFRYLIFQVEYMEVSSEQQLFFMREAVALGERGRIFAPPNPWVGCVIVKNGCIIGRGWHKGIGSPH
AEVCAFQDQTSSLVGADVYVTLEPCCHFGRTPPCVDLLIKSKVSSVYIALLDPDPRVCKRGVARLKEAGISVYVGIGHEE
AKASLQPYLHQRETGLPWVVMKTAASLDGQTSDRRGISQWISGEQARLDVGRLRAESQAVIVGSRTVCLDNPRLSARMPS
GDLYERQPLRVVVDSRGSVPLDARVWNPDSGNVLLATTEQCSKEHIQKLEDRGVEVWKSSPQQVDLKRLLQYLAEKGCLQ
VLVEGGARLHSAFWREHLVNAGVIYWGPKFLGDQGSPMLRDLQLCLDNAEHVKITKTFLVGDSVKTCFECVGREDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-41 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-41 41