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Name : serS (TC_0102) Accession : NP_296486.1 Strain : Chlamydia muridarum Nigg Genome accession: NC_002620 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 120506 - 121792 bp Length : 1287 bp Strand : - Note : identified by match to PFAM protein family HMM PF02403 DNA sequence : ATGTTGGATATACGATTAATACGCAAGGAACCAAAAGAATGTGAAGCCCGTCTTCAAAAAAAAGATCCCTCTATTTCGTT AGAACGCCTTCTAGACTTAGATAAAAATGTGCGTCAACTGAAAGCAGATTCAGAGTCCTTACTTGCAAGACGTAAAGCTC TTTCTGGCCAAATTCATAAAGCTAAAGTTGCTAACGAGGATGCCACTCCCCTTATTCAAGGGGTTAATGCTATTGCAGAC CAACTTGTTGCTTTTGAAAAAACGTTACAAGAACAAGAAGCTCTTCTACTAGATCTCATGGCAAGACTGCCTAATTATCC AGATGAGGACGTTCCTGTCTCCCCTGATAAATCGGGGAACAAAATTATTAAAAGCCACGGAGAAATTCCAACTTTTACCT TTCCTCCTAAACACCATGTACAACTCAATGAAAAGCTGCAAATTTTAGATTTTAAACTTCCAGCCAAAACCTCAGGTTCC GGCTGGCCAGCTTATAAAAATGAAGGCGTTCTTTTAGAATGGGCTCTGTTGACTTACCTTCTTAATAAGCAGCAAGCGCA TGGATTTCAACTATGGCTTCCTCCACTACTTGTCAAACGCGATATTCTTTTTGGCTCAGGCCAAATTCCAAAATTTGATG GGCAGTACTATCGTGTTGAAGACGGAGAGCAGTCTCTTTTCCTTATTCCAACAGCAGAAGTTGTTCTTAATGGATTCCAT TCTCAAGAGATCTTAAACGAGCAAGATCTCCCTCTCTATTACGCAGCTTTTACCCCTTGTTTCCGCAGGGAAGCTGGTGC TGGAGGATCTCATGAACGAGGATTAGTAAGAGTCCACCAATTCCATAAAGTAGAGATGTTTGCTTTTACAACCCCAGAAC AAGAAGAGATTGCTTATCAAAAAATGATTGGCATTGTTGAAGAAATTCTTTCTGAACTTCAACTCCCTTACCAGCTCTCT CTACTTTCTACAGGGGACATGTCTTTCACAGCCAAAAAAACGATCGATGCAGAGGTTTGGCTTCCAGGGCAACAAGCTTT TTATGAGGTCTCTTCTATTTCCAAGTGTGGAGATTTTCAATCTCGTCGCTCTGAGACTCGCTATCGCGATGCTCAAGGCA AATTACATTTCGTGAACACTCTAAATGGCTCAGGATTAGCAACTCCTAGATTGTTGGTAGCTATTTTAGAAAATTATCAA CAAGAGGATGGATCCGTTGTGATTCCTCATGCGCTGCGCCCTTATATGAATAACCAAGAAATTCTCCTACCCAAAACAGA TAGATAA Protein sequence : MLDIRLIRKEPKECEARLQKKDPSISLERLLDLDKNVRQLKADSESLLARRKALSGQIHKAKVANEDATPLIQGVNAIAD QLVAFEKTLQEQEALLLDLMARLPNYPDEDVPVSPDKSGNKIIKSHGEIPTFTFPPKHHVQLNEKLQILDFKLPAKTSGS GWPAYKNEGVLLEWALLTYLLNKQQAHGFQLWLPPLLVKRDILFGSGQIPKFDGQYYRVEDGEQSLFLIPTAEVVLNGFH SQEILNEQDLPLYYAAFTPCFRREAGAGGSHERGLVRVHQFHKVEMFAFTTPEQEEIAYQKMIGIVEEILSELQLPYQLS LLSTGDMSFTAKKTIDAEVWLPGQQAFYEVSSISKCGDFQSRRSETRYRDAQGKLHFVNTLNGSGLATPRLLVAILENYQ QEDGSVVIPHALRPYMNNQEILLPKTDR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-80 | 42 |
