Gene Information

Name : metB (VNG1172G)
Accession : NP_280068.1
Strain : Halobacterium salinarum NRC-1
Genome accession: NC_002607
Putative virulence/resistance : Resistance
Product : cystathionine alpha synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 883195 - 884376 bp
Length : 1182 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGGCAACGACGACGCCGATGACGCAGCCGACCGGTTCCAGACACGCGCGATCCACGCGGGCCAAGCGCCGGACTC
GGAGACGGGCGCGCTGATGACGCCGATCTTCGCGAACTCGACGTACGTCCAGGACGGCCCCGGCGATCACCGCGGCTACG
AGTACTCCCGGACGGGCAACCCGACGCGCACGGATCTGGAAGCCAACCTCGCGAGCCTGGAAGGCGGCGAGCACGGGCGC
GCGTTCGCCTCCGGAATGGCCGCGATCAACACCGTGTTGAACCTCCTGGCGGCCGGCGACCACGTGGTGGCGGGCGACGA
CGTGTACGGCGGCACCCACCGCATCTTCACGCAGGTCTACGAGGACTACGACATCGACTTCGACTTCGTCGACACCACCG
ACCACGACGCCGTCCGGGAGGCCATGGGGGAGGCGACGGAACTCCTCTGGGTGGAGACCCCGACGAACCCGTTGTTGAAC
GTCAACGACATCGGCGCGCTCGCGGACATCGCCCACGAGCACGACGCGCTGTGTGCGGTGGACAACACGTTCGCGACGCC
GTACCTCCAGCGCCCCCTGGAGTTCGGTGCCGACATCGTCTCGCACAGCCTCACGAAGTACCTCGGCGGGCACAGCGACC
TCGTTGCGGGCGCGCTGATCACCGACGACGACGACCTCGACGAGCAGTTCGGGTTCTACCAGAACTCCGTCGGCGCGACG
CCCAGTCCGTTCGACTGCTTCCTGGTGTTGCGCGGCACGAAAACCCTGGGCGTGCGCATGGACCGCCACTGTGAGACGGC
CATGGAGCTTGCGGCGTGGCTTGCGGATCACGAGCACGTCAGCCAGGTCCACTACCCGGGCCTGGAGAGCCACCCCGACC
ACGAGCTGGCCGCCGCGCAGATGGACGGCTTCGGCGGCATGGTCTCCTTCGAGTTGGACGCCACCCTCGAAGCGGCCAGC
GCGTTCGTCGAGGAGACCGACGTGTTCACGCTCGCGGAGTCACTGGGCGGCGTGGAGTCACTGATCGAGCAGCCCGCGGC
GATGACTCACGCCGCCATCCCGAAGGCCGAACGGGAGGCCGCGGGGCTCACCGACGGGCTGATCCGGGCGAGCATCGGCG
TCGAGCACGTCGACGACCTCAAGGCGGACCTCCAGCAGGCCATCGAGGCCGCCCTGCAGTAG

Protein sequence :
MSGNDDADDAADRFQTRAIHAGQAPDSETGALMTPIFANSTYVQDGPGDHRGYEYSRTGNPTRTDLEANLASLEGGEHGR
AFASGMAAINTVLNLLAAGDHVVAGDDVYGGTHRIFTQVYEDYDIDFDFVDTTDHDAVREAMGEATELLWVETPTNPLLN
VNDIGALADIAHEHDALCAVDNTFATPYLQRPLEFGADIVSHSLTKYLGGHSDLVAGALITDDDDLDEQFGFYQNSVGAT
PSPFDCFLVLRGTKTLGVRMDRHCETAMELAAWLADHEHVSQVHYPGLESHPDHELAAAQMDGFGGMVSFELDATLEAAS
AFVEETDVFTLAESLGGVESLIEQPAAMTHAAIPKAEREAAGLTDGLIRASIGVEHVDDLKADLQQAIEAALQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-87 51
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-88 51
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-62 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB NP_280068.1 cystathionine alpha synthase BAC0207 Protein 1e-69 45