Gene Information

Name : yfmF (VNG2552G)
Accession : NP_281125.1
Strain : Halobacterium salinarum NRC-1
Genome accession: NC_002607
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1914032 - 1914853 bp
Length : 822 bp
Strand : +
Note : -

DNA sequence : 
ATGCCACAGCGACCACACACCGACACCGACGAAGACCCCGTGGAGTCGGCCGCAGTGCTCGGCACCGACCTCGAACTCGG
GTACGGCGACACCACCGTCGTCGACTGCGCGGACATCGTCGTGCCCGCCGGCGAAGTCACGGCGCTCGTGGGCCCCAACG
GCTCCGGCAAATCCACGCTGCTGAAGGGGTTCTCCGCGGAGCTGGCCCCGGACGCCGGCACCGTTCTGCTCGACGGGACC
GCAGTCCACGACCGCTCGCCGAAACAACTCGCCAGCGAACTCGGCCTGCTCGCACAGGAGAACGACGCGCCCGGCGGACT
CACCGTCGGCGACCTCGTCACCCACGGCCGCTACCCCCATCGGGGGTTCCTCGACGCCCTCAACGACGCCGACCACGCGG
CCATCGACCGCGCCATCGACCTCGCCGGCGTCGAGCACCTCCGGGACACCGCGCTCTCGGAGCTCTCCGGCGGCCAGAAA
CAGCTCGCGTTCGTCGCCATGGCGCTGGCACAAGACACCGACGTACTGTTGTTAGACGAACCGACGACGTATCTGGACCT
GCACCACCAACTCCGCGTGATGGAGGTCGTCCGCACCCTCAACGAGGACCGCGATGTGACCGTCTGTGTGGTGCTCCACG
ACCTCCAGCAGGCCGCCCGGTTCGCGGACTACCTCGTCGCCCTCGATGACGGCACCGTCTACGACTGGGGGCCGCCCGAG
GACGTGGTCACGGAGGACCTGCTCGCGGACGTGTTCGGCGTCGACGCCGCCGTCAGCTACGACGACGAACCCCGCATCGT
GCCGCGCCGGGCGCTCGACTAA

Protein sequence : 
MPQRPHTDTDEDPVESAAVLGTDLELGYGDTTVVDCADIVVPAGEVTALVGPNGSGKSTLLKGFSAELAPDAGTVLLDGT
AVHDRSPKQLASELGLLAQENDAPGGLTVGDLVTHGRYPHRGFLDALNDADHAAIDRAIDLAGVEHLRDTALSELSGGQK
QLAFVAMALAQDTDVLLLDEPTTYLDLHHQLRVMEVVRTLNEDRDVTVCVVLHDLQQAARFADYLVALDDGTVYDWGPPE
DVVTEDLLADVFGVDAAVSYDDEPRIVPRRALD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-42 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-41 43
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 1e-28 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-39 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-38 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-38 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-38 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfmF NP_281125.1 ferrichrome ABC transporter ATP-binding protein BAC0164 Protein 4e-42 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfmF NP_281125.1 ferrichrome ABC transporter ATP-binding protein VFG1042 Protein 3e-42 45
yfmF NP_281125.1 ferrichrome ABC transporter ATP-binding protein VFG0925 Protein 3e-45 44