Gene Information

Name : yvrO (VNG0002G)
Accession : NP_279166.1
Strain : Halobacterium salinarum NRC-1
Genome accession: NC_002607
Putative virulence/resistance : Resistance
Product : amino acid ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1450 - 2115 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCATCATCGAACTCGAAGGCGTGGTCAAACGGTACGAAACCGGTGCCGAGACAGTCGAGGCGCTGAAAGGCGTTGA
CTTCTCGGCGGCGCGCGGCGAGATGGTGACCGTCGTTGGGCCGTCCGGCTCCGGCAAGAGCACGATGCTGAACATGATCG
GCTTGCTTGACTCGCCCACGGCGGGCAGCGTCACCCTCGACGGCCAGGACGTGACCGGGTTCAGTGAGGACGAGCGCACC
GAGGAGCGCCGCGCGGAACTGGGGTTCGTCTTCCAGTCGTTTCACCTGCTCCCGATGCTGACGGCCGTGGAGAACGTGGA
ACTGCCGTCGATGTGGGACACCTCCGTTGACCGCCACGACCGCGCGGTCGACCTCCTGGAGCGCGTCGGGCTCGGGGACC
GTCTTACACACACCCCGGGCGAGCTCTCCGGCGGCCAACAGCAGCGCGTCGCGATCGCGCGCTCGCTGATCAACGAACCC
GAGATTCTGCTGGCCGACGAGCCAACTGGCAACCTCGATCAGGAGACCGGTGGCACGATCCTCACCGAGATGCAGCGCCT
CACTGAGGAGGAGAACATCGCCGTGGTTGCGATCACTCACGACACGCAACTCGAGGAGTTCTCCGACCGCGCAGTCAACC
TCGTCGATGGGGTGTTACACACGTGA

Protein sequence : 
MSIIELEGVVKRYETGAETVEALKGVDFSAARGEMVTVVGPSGSGKSTMLNMIGLLDSPTAGSVTLDGQDVTGFSEDERT
EERRAELGFVFQSFHLLPMLTAVENVELPSMWDTSVDRHDRAVDLLERVGLGDRLTHTPGELSGGQQQRVAIARSLINEP
EILLADEPTGNLDQETGGTILTEMQRLTEEENIAVVAITHDTQLEEFSDRAVNLVDGVLHT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yvrO NP_279166.1 amino acid ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-38 47
yvrO NP_279166.1 amino acid ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-38 43
yvrO NP_279166.1 amino acid ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-46 43
yvrO NP_279166.1 amino acid ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-41 42
yvrO NP_279166.1 amino acid ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 6e-42 41