Gene Information

Name : lpdA (VNG2220G)
Accession : NP_280867.1
Strain : Halobacterium salinarum NRC-1
Genome accession: NC_002607
Putative virulence/resistance : Unknown
Product : LpdA
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1249
EC number : -
Position : 1649819 - 1651243 bp
Length : 1425 bp
Strand : +
Note : dihydrolipoamide dehydrogenase

DNA sequence :
ATGGTTGTCGGAGACATCTCGACTGGGACGGACGTCGCGGTCGTTGGCGCTGGCCCCGGTGGCTACGTGGCGGCGATCCG
CGCGGGACAGCTCGGCCTCGACGTGACGCTCGTCGAGAAGGACGCCTACGGCGGCACCTGCTTGAACTACGGCTGCATCC
CGTCGAAGGCGATGATCACGGCGTCGGGCGTCGCCCACGAGGCGGGCCACGCCGAGGAGATGGGCGTGTACGCCGACCCC
GACGTGGACGTGGCGGAGATGGTCGACTGGAAGGACGGCGTCGTCGACCAGCTCACGGGCGGCGTGGAGAAGCTCTGCAA
GGCCAACGGCGTGAACCTCATCGAGGGGCGCGCGGAGTTCGCGGGCAGCGACAAGCTGCGGGTCGTGCACGGCGGCGACG
GCCAGGGCTCGGAGACCATCGAGTACGAGCACGCCATCGTGTCGACGGGCTCTCGGCCCATCGAGGTGCCGGGCTTCGAC
TTCGGCGACGACCCCGTGTTGGATTCGCGGCAGGCGCTGGCGATGGCGGAGCTGCCGTCGTCGATGGTGATCGTCGGCGG
CGGCTACATCGGCATGGAGCTGTCGACGGTGTTCGCGAAGCTCGGCGTGGACGTGACCGTCGTGGAGATGCTGGATGGCA
TCCTGCCACAGTACGGCGACGACATCGCGCGCCCCGTGAGACAGCGCGCCGAGGAACTCGGCATCGACTTCCACTTCGGC
CTCGCGGCCGACAGCTGGACGGACACCGACGACGGCATCGTGGTCACCGCCGCCGACGAGGACGGCGAGGAGACCGAGTT
CGAGACCGAGAAGGTGCTCGTGGCGGTCGGCCGCCAGCCAGTCACCGACACGCTGAACCTGGACGCCGTCGGCCTCGAAC
CGAACGACGATGGGCGCCTGGAGACCGACCACGAGGCCCGCACCGACGTCGAGAACGTCTTCGCGATCGGCGACGTCGCG
CCCGGCCCGATGCTCGCGCACAAGGCCAGCAAGGAGGGCGAGGTCGCCGCGGAAGTCATCGCGGGCGAGCCGGCGGCCCT
GGACTACCAGGCCGTGCCGGCGGCGGTGTTCACCGACCCCGAGATCGGGACCGTCGGGCTCACCGAGGACGACGCCGCCG
CGCAGGGCTTCGACCCGGTCGTCGGGACGTTCCCGTTCAACGCCAGCGGGCGCGCGCTCACCACGGGCCACGACGACGGC
TTCGTGGAGGTCGTCGCCGACGAGGAGTCGGGGTTCCTGCTGGGCGCGCAGATCGTCGGCCCGGAGGCCAGCGAGCTCGT
CGCCGAGCTCGGCCTCGCGATCGAGATGGGGGCCACCCTGGAGGACGTCGCGTCCACCATCCACACGCATCCGACGCTGT
CCGAGGCCACGATGGAGGCCGCCGAGCACGCGCTCGGCCACGCCGTCCACACGCTGAACCGGTAA

Protein sequence :
MVVGDISTGTDVAVVGAGPGGYVAAIRAGQLGLDVTLVEKDAYGGTCLNYGCIPSKAMITASGVAHEAGHAEEMGVYADP
DVDVAEMVDWKDGVVDQLTGGVEKLCKANGVNLIEGRAEFAGSDKLRVVHGGDGQGSETIEYEHAIVSTGSRPIEVPGFD
FGDDPVLDSRQALAMAELPSSMVIVGGGYIGMELSTVFAKLGVDVTVVEMLDGILPQYGDDIARPVRQRAEELGIDFHFG
LAADSWTDTDDGIVVTAADEDGEETEFETEKVLVAVGRQPVTDTLNLDAVGLEPNDDGRLETDHEARTDVENVFAIGDVA
PGPMLAHKASKEGEVAAEVIAGEPAALDYQAVPAAVFTDPEIGTVGLTEDDAAAQGFDPVVGTFPFNASGRALTTGHDDG
FVEVVADEESGFLLGAQIVGPEASELVAELGLAIEMGATLEDVASTIHTHPTLSEATMEAAEHALGHAVHTLNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 9e-77 43