Gene Information

Name : VNG1793C (VNG1793C)
Accession : NP_280533.1
Strain : Halobacterium salinarum NRC-1
Genome accession: NC_002607
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1326538 - 1327446 bp
Length : 909 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGCAACGGAAACCGACCTCGAGGAACTGCGGCGCGGCAGCGAGCTGGTGAAACGCGGGTTCGCGAAGATGCAGAAGGG
CGGCGTCATCATGGACGTTGTGAACCGCGAGCAGGCGCGCATCGCTGAGGACGTGGGTGCGGTTGCTGTGATGAACCTTG
AGGCCGTGCCGGCGGACATTCGGAAGCGCGGCGGCGTGGCGCGGATGGCCGACCCGGCGAGCCTGACCGGCATCATCGAG
GAGGTGTCGATCCCGGTGATGGGGAAGTCCCGGATCGGCCACCGCAAGGAGGCCGAAATCCTGCAGGCGGTGGGCGCGGA
CATGATCGACGAAAGCGAGGTGTTGACGCCCGCCGACGACGAGTACCACATCGACAAGCGCGAGTTCACCGCGCCGTTCG
TCTGCGGGGCGCGCAACCTCGGGGAGGCGCTGCGCCGCATCGACGAGGGCGCGGCGATGATCCGCACCAAGGGGGAGGCC
GGCACCGGTGACGTCAACCAGGCGGTCCACCACCAGCGCAACATCAAATCCGCCATCCGCAAGCTCGAAGGCATGGATTA
CGAGGAGCGGGACATGTGGGCCCGCGACCACGAAGCCCCCCGAGAGCTCGTGCACGAGACCGCGGAGATGGGGCGGCTGC
CGGTGGTCAACTTCGCGGCGGGCGGCATCGCGACGCCGGCCGACGCGGCGCTGATGATGCATCACGGCTGTGACGGCATC
TTCGTCGGTTCAGGGATCTTCGGCGCAGAGAACCCCGAGGCCATGGGCCGGGCGGTCGTGGACGCCGTGAACAACCACGA
CGACCCCGAGCGCCTCGCGGAGATCGCGTCGAACATCGGGGAGGGCATGCAGGGCGACCCGAACGCCGACCTGCCCGAGG
ACGAGCGGATGCAGGACCGCGGGAACTAG

Protein sequence :
MATETDLEELRRGSELVKRGFAKMQKGGVIMDVVNREQARIAEDVGAVAVMNLEAVPADIRKRGGVARMADPASLTGIIE
EVSIPVMGKSRIGHRKEAEILQAVGADMIDESEVLTPADDEYHIDKREFTAPFVCGARNLGEALRRIDEGAAMIRTKGEA
GTGDVNQAVHHQRNIKSAIRKLEGMDYEERDMWARDHEAPRELVHETAEMGRLPVVNFAAGGIATPADAALMMHHGCDGI
FVGSGIFGAENPEAMGRAVVDAVNNHDDPERLAEIASNIGEGMQGDPNADLPEDERMQDRGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 6e-71 61
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 6e-71 61
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 7e-71 60