Gene Information

Name : arsB (Ta0170m)
Accession : NP_393648.1
Strain : Thermoplasma acidophilum DSM 1728
Genome accession: NC_002578
Putative virulence/resistance : Resistance
Product : arsenite transport permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 174599 - 175878 bp
Length : 1280 bp
Strand : +
Note : -

DNA sequence :
CTGTTGATCGCAGCTGCAGTTTTTGCCTTTACACTCATCCTTGTGATCATCAGGCCATGGAGACTGGATATAGGCTATTC
CGCGATCATAGGCGCCATAATATCGATAGCTCTTGGCTCTCAACACCTGTTGACATAATCAAGGTCTGGGGCATAATCTG
GAATCCCACCTTCACCTTCGTTGCCATAATAATAATGTCCCTTGTTTTCGATTATTCCGGTTTTTTCGAGTACTACGCCA
TAAGGATATCGAAGATGGCTGGCGGAAACGGCCTGAAGCTCTTCGTCTTCATAGTGCTGCTTGGATCGGCCATATCGGCC
TTCTTTGCAAATGACGGCACTGCACTGGTTCTTACGCCAATAGTATCGGCCATAACCGCTAGGACCGGCATGGACAAAAG
GCGGGCACTTGCTTTCGTCATGGCAACAGGTTTTATAGCTGATTCCTCCAGCCTGCCCTTCATAATAAGCAACCTCGTCA
ACATAATAGGGGCAGGGTACTTTGGCGTATCATTTGCACAGTACGCGGAAACCATGATCGTTCCAGACATAGTCAGCATA
ATGGCCAGCCTTGGCGTACTGATCCTCATCTACAGGAAGGAAGCATCGGTTGAATACAGCACAGAGGATGTGGGCGATGA
GAACAGGGTCATAGTGGACAGCCGAATATTCAGGCTGGCTTTGCCATTCATAGCCATCGTTGTACTTGCTTACTTCCTCT
CCAGCCTGGACAGCATACCGGTGAGCTTCATTGCACTTCCAGCCGCATTGACCGTGCTCTACATTGCAAGGGTCAATGGC
AAGATAAATACAGGCCTTGTTCTTAGAGAGGCGCCATGGCAGATCGTCCTCTTCTCGCTGGGTATGTACGTGGTAGTTTA
CGGTTTTGGAAATGCCGGCCTCACTGATCTCATAACCGATCTTATGCGTTCACTGATGTCGCTGGGAAATCCGGCGTATA
CTCTTCTGGGCGGGTTGTTTTTTGGCTTTCTTGCCGGGGCTATGAACAATCTGCCGTCCACGATGATGGGCGTCCTCACG
GTATCCAGTCTCAGTGGTAACAGGTTCCTGCTTTATGCAAACGTAATAGGAAATGACATAGGCCCGAAGTTCACGCCGAT
AGGTTCTCTGGCAACTCTCCTGTGGATGTACACGCTCAGGCGGAAGCATGGAATAGAGGTAACGCCGCTCTATTACATGA
AGATAGGCTTCATCGCAGCGCTCCCAGTTCTGGTTGTGACGCTCCTTTCACTTTATGCGGTGGTATCCCTAGGCCTTTAA

Protein sequence :
MLIAAAVFAFTLILVIIRPWRLDIGYSAIIGAIISIALGLSTPVDIIKVWGIIWNPTFTFVAIIIMSLVFDYSGFFEYYA
IRISKMAGGNGLKLFVFIVLLGSAISAFFANDGTALVLTPIVSAITARTGMDKRRALAFVMATGFIADSSSLPFIISNLV
NIIGAGYFGVSFAQYAETMIVPDIVSIMASLGVLILIYRKEASVEYSTEDVGDENRVIVDSRIFRLALPFIAIVVLAYFL
SSLDSIPVSFIALPAALTVLYIARVNGKINTGLVLREAPWQIVLFSLGMYVVVYGFGNAGLTDLITDLMRSLMSLGNPAY
TLLGGLFFGFLAGAMNNLPSTMMGVLTVSSLSGNRFLLYANVIGNDIGPKFTPIGSLATLLWMYTLRRKHGIEVTPLYYM
KIGFIAALPVLVVTLLSLYAVVSLGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-69 47
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-65 45
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-69 44
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-68 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB NP_393648.1 arsenite transport permease BAC0031 Protein 4e-69 47
arsB NP_393648.1 arsenite transport permease BAC0578 Protein 3e-69 46
arsB NP_393648.1 arsenite transport permease BAC0576 Protein 2e-68 46
arsB NP_393648.1 arsenite transport permease BAC0577 Protein 3e-70 46
arsB NP_393648.1 arsenite transport permease BAC0575 Protein 1e-70 46
arsB NP_393648.1 arsenite transport permease BAC0574 Protein 9e-69 45