Gene Information

Name : clpE (BH2179)
Accession : NP_243045.1
Strain : Bacillus halodurans C-125
Genome accession: NC_002570
Putative virulence/resistance : Virulence
Product : ATP-dependent proteinase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2302327 - 2304462 bp
Length : 2136 bp
Strand : +
Note : -

DNA sequence :
ATGAAATGTCAACAATGTCAAACCAATGAAGCGACTGTCACTTTGCACGTAAAGATTAATCAATCCAGTCAACAACTTCA
TGTTTGTTCAAGCTGCTATCAACAGATCGAGCAGCCATTTGGTTTTTCCGACTTTTCTTCATTTGACAACATGTTTAAGC
AATGGATCGGTTCTACTTCTTCTTCCATGAATGGAAGCGATCAACCTGTAAGCTCTATCGCAATGAAATCAAAAACAAAT
CATAGCGGAGGTGGTTTTTTAGATCAGCATGGTCGAAATGTAACGGCAGAAGCAAAAGCAGGACAAATCGACCCTGTTAT
TGGACGTGACCAAGAGGTTGAACGGCTGATCCAAATTTTATGCCGCCGTACGAAAAATAACCCTGTGCTGATTGGAGAAG
CTGGTGTCGGGAAAACGGCGATTGTCGAAGGCTTTGCTCGACGAATCGCCGAAGGCAACGTTCCGGCGAAAATGAAAAAC
AAGGAAGTGTACGAACTTGAGCTATCCTCTCTCGTGGCAGGAACGAGCTATCGCGGCCAATTTGAAGAAAAGATGGAGCA
ACTCGTCCGTGAACTAGAAGCGCGGGACGACGTCATCCTCTTTATCGATGAAATCCATATGGTCGTAGGTGCAGGTGCTA
CGTCTGAAGGCTCAATGGATGCCGGAAATATCCTGAAACCCGCCCTTGCTAGAGGACAATTGCAGATCATTGGTGCAACT
ACTTTAAACGAATACCGTAAAATTGAAAAAGATCCGGCCCTTGAACGTCGCTTTCAACCAATCACAGTTAAGGAGCCGAC
ACTTGAAGCAGCGGTTGAGATTTTAAAAGGGGTGCGACCCATCTATGAAGCTTATCATCACGTAAGCTACCCTGATGATG
TGCTTGAAGCGTGCGTTCGCTTATCCGATCGATACATTCAAGATCGTTTCTTGCCAGATAAAGCGATTGATTTAATGGAT
GAGATTGGCTCAGCGCTCACTCTTACATCTGGTCCTACGACCCTTGATGAACTAAAGGAACGCCTTGCTGAAATCACAAA
AGAAAAACAACAGGCGACGGCACAAGAAGATTATGAACGCGCAGCCAAACTCCGTGATGAGGAAAATTTGTTACACAAGC
AAATGAATGAAAACCGTGCGGAAAAAACTGAAGTTACTGTTGCAGACATTCAAGGGCTCATTGAAAAACGGACAGGCATT
CCTGTTCGCAAGCTGCAAAAAGCAGAGCAAACGAAAATGAAAGATTTGCACAACCGTCTCGCTAGACAAGTGATTGGTCA
GGCAGAAGCGGTTGAAAAAGTAGCAAAAGCGATCAAACGGAGCCGTGCTGGATTGAAGCCGAAAAATCGCCCGATTAGCT
TTATGTTTGTAGGACCAACAGGTGTTGGTAAAACGGAACTGACGAAAACACTAGCCCAAGAATTGTTTGGCTCAAAAGAA
GCGATGATCCGCCTCGATATGAGTGAGTTTATGGAAAAACACTCTGTCTCTAAACTAATTGGATCACCTCCAGGTTATGT
CGGACATGACGAAGGCGGCCAATTAACAGAGCAAGTTCGCCGTAAGCCTTACAGCATCATTTTGCTTGATGAAATTGAAA
AAGCGCACCCTGATGTTCAGCATATGTTCTTGCAAATCCTTGAGGACGGACGTCTCACTGACAGTCAAGGCCGAGCCGTC
TCCTTTAAAGATACGGTGATCATTATGACGTCCAACGCAGGTGTTGGTGTCAAAAAAATAACCGTCGGCTTTGAGAAGAA
TGTGGAAACACAAAATAAAGCCGGAATTCTTGAACAAATCAACCAATACTTTAAACCTGAATTCTTAAACCGTCTTGATG
CGATTATTGAGTTTAACCATCTCACAGAGCAAGATCTTATGCGAATTGTTGACTTGATGCTACAAGACTTAGGAGACCGT
CTAGCTGAACAAGATATATCCCTTACTGTCTCTGAGAAAGCAAAAGCACAACTCGTTAAAATTGGCTCTGACCGTGCATT
TGGCGCGAGACCATTGCGCCGGGCAATTCAAGACCATGTCGAGGACAGCATAACCGAAAAGCTGATCGATGAAGAAAGCA
TCAACGCCATTCATGTCGATTATGATGTCGTTCAACAATCGTTCACTTTCGCGTAA

Protein sequence :
MKCQQCQTNEATVTLHVKINQSSQQLHVCSSCYQQIEQPFGFSDFSSFDNMFKQWIGSTSSSMNGSDQPVSSIAMKSKTN
HSGGGFLDQHGRNVTAEAKAGQIDPVIGRDQEVERLIQILCRRTKNNPVLIGEAGVGKTAIVEGFARRIAEGNVPAKMKN
KEVYELELSSLVAGTSYRGQFEEKMEQLVRELEARDDVILFIDEIHMVVGAGATSEGSMDAGNILKPALARGQLQIIGAT
TLNEYRKIEKDPALERRFQPITVKEPTLEAAVEILKGVRPIYEAYHHVSYPDDVLEACVRLSDRYIQDRFLPDKAIDLMD
EIGSALTLTSGPTTLDELKERLAEITKEKQQATAQEDYERAAKLRDEENLLHKQMNENRAEKTEVTVADIQGLIEKRTGI
PVRKLQKAEQTKMKDLHNRLARQVIGQAEAVEKVAKAIKRSRAGLKPKNRPISFMFVGPTGVGKTELTKTLAQELFGSKE
AMIRLDMSEFMEKHSVSKLIGSPPGYVGHDEGGQLTEQVRRKPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRAV
SFKDTVIIMTSNAGVGVKKITVGFEKNVETQNKAGILEQINQYFKPEFLNRLDAIIEFNHLTEQDLMRIVDLMLQDLGDR
LAEQDISLTVSEKAKAQLVKIGSDRAFGARPLRRAIQDHVEDSITEKLIDEESINAIHVDYDVVQQSFTFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-156 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpE NP_243045.1 ATP-dependent proteinase VFG0080 Protein 0.0 59
clpE NP_243045.1 ATP-dependent proteinase VFG0079 Protein 5e-159 53