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Name : serS (BU313) Accession : NP_240135.1 Strain : Buchnera aphidicola APS Genome accession: NC_002528 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 346190 - 347473 bp Length : 1284 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAAATCCTTATTTATTACGAAATGAATTACATTTAACAGCCAAAAAACTATTAAAAAAAGGTTATAAATTAAATAT TTCTAAAATTTCTTCTATGGAAGAAAAAAGAAAAACTTTACAGATTCAAACTGAAAATTTGCAATTTAAGCATAATGCTT TATCAAATTTATTTAAAGAAAACAAAAATATTAAGAATAAAAATGAATTGTTAAGACATCAAGTTATACAGTCAAGTAAA GATTTAAACGCTTCTAAAATTGAACTTAATTCTTTAAAAGAAAAAATACATCATTTTTCTATGTGCATACCTAATATTCC TTCTGACGATGTTCCAGAGGGAAATACATCGATTAATAATAAAGAAATTAAATACTGGGGTCAAAAAAAGAAGTATGATT TTGAAATCCAAGATCATATAGAGCTAGGAAAAAAATTTAACGAATTAGATTGGAAATCTTCTGCACAAATGTCAGGATCA CGATTTGTTATAATGAAGGGAAAAATTGCTCTTTTACACCGTGCACTTAGTCAATTTATGTTAGACTTGCATACTTTAAA ACATGGTTATATAGAATCTTATGTTCCTTATTTAGTTCATTCTGAAGCTCTATATGGAACAGGACAATTACCAAAATTCA GTGATGATTTATTCCATATAAATTTGACAGATAAAAAAAAGTACATATTAATTCCTACTGGAGAAGTTCCATTAACTAAT TTAGTCTATGATCAAATCATAGACGAAAAAGATTTACCTATCATGTTAACTGCACATACTCCTTGTTTCCGATCAGAAGC ATCTTCTTATGGACGTGATACTAAAGGATTAATTCGATTGCATCAATTTGATAAAGTAGAATTAGTACAGATTGTTAAAC CAGAGAAATCTTATGAAGCATTAGAAAAACTAACTAATCATGCGGAAAAAGTTTTACAACTTCTAAATTTACCATATAGA AAAATGCTTTTATGCACAGGGGATACAGGTTTTGCAGCAGTAAAAACTTACGATTTAGAAGTTTGGTTTCCTTCTGAAAA AAAATATAGAGAAGTTTCATCATGTTCTAATATGAGCGATTTTCAAGCTCGTCGTATAAAAGCTCGTTATAGAAAAAAAT CTGAACAAAAAAATTTTTTTGTACACACATTAAATGGTTCTGGTTTGGCAATAGGCAGAACATTAGCTGCTATTTTAGAA AATTATCAACATTCTAATGGTCGCATAGAGATTCCCAAAGTTTTACAAAAGAAATATATGCAGGGATTAGAATTTATAAA CTAG Protein sequence : MLNPYLLRNELHLTAKKLLKKGYKLNISKISSMEEKRKTLQIQTENLQFKHNALSNLFKENKNIKNKNELLRHQVIQSSK DLNASKIELNSLKEKIHHFSMCIPNIPSDDVPEGNTSINNKEIKYWGQKKKYDFEIQDHIELGKKFNELDWKSSAQMSGS RFVIMKGKIALLHRALSQFMLDLHTLKHGYIESYVPYLVHSEALYGTGQLPKFSDDLFHINLTDKKKYILIPTGEVPLTN LVYDQIIDEKDLPIMLTAHTPCFRSEASSYGRDTKGLIRLHQFDKVELVQIVKPEKSYEALEKLTNHAEKVLQLLNLPYR KMLLCTGDTGFAAVKTYDLEVWFPSEKKYREVSSCSNMSDFQARRIKARYRKKSEQKNFFVHTLNGSGLAIGRTLAAILE NYQHSNGRIEIPKVLQKKYMQGLEFIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-91 | 47 |
