Gene Information

Name : PA0880 (PA0880)
Accession : NP_249571.1
Strain : Pseudomonas aeruginosa PAO1
Genome accession: NC_002516
Putative virulence/resistance : Unknown
Product : ring-cleaving dioxygenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0346
EC number : -
Position : 962545 - 962925 bp
Length : 381 bp
Strand : +
Note : Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)

DNA sequence :
ATGCAGATCGACCGTCTCGACCACCTGGTGCTCACCGTCCGCGACATCGACGCCAGCATCGATTTCTACACCCGCGTGCT
GGGCATGCGCGCCGTTACCTTCGGCGCGGGTCGCAAGGCCCTCGCCTTCGGTGCGCAGAAGATCAACCTGCACCAGGCCG
GGGGCGAATTCGAACCCAAGGCCGAGCGACCTACGCCAGGGTCCGCCGACCTCTGTTTCATCGTCGCCACGCCACTCGAG
GCGGTGGCCGAGCAACTGCGCCAGCAGGCCGTGGAAATCCTCGAGGGCCCGGTGCAGCGCACCGGCGCCGGCGGGCCGAT
CCTCTCGCTGTACCTGCGCGACCCCGACCTGAACCTGATCGAACTGAGCAACCCGCTGTAG

Protein sequence :
MQIDRLDHLVLTVRDIDASIDFYTRVLGMRAVTFGAGRKALAFGAQKINLHQAGGEFEPKAERPTPGSADLCFIVATPLE
AVAEQLRQQAVEILEGPVQRTGAGGPILSLYLRDPDLNLIELSNPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK97551.1 putative protein Not tested SPI-6 Protein 3e-36 66