|
Name : PA5312 (PA5312) Accession : NP_253999.1 Strain : Pseudomonas aeruginosa PAO1 Genome accession: NC_002516 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 5982097 - 5983590 bp Length : 1494 bp Strand : - Note : Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene) DNA sequence : ATGACCACCCTGACCCGCGCCGACTGGGAAGCCCGCGCCAAAGACCTGAAGATCGAAGGCCGTGCCTTCGTCAACGGCGA ATACAGCAACGCCGCCTCCGGCGAGACCTTCGATTGCCTGAGCCCGGTGGATGGCCGCTTCCTGGCCAAGGTCGCCAGTT GCGACCTGGCCGATGCCGAGCAGGCGGTCAAGGTCGCCCGCAATGCCTTCGATTCCGGCGCCTGGTCGCGCCTGGCGCCG GCCAAGCGCAAGCAGACGATGATCCGCTTCGCCGATCTGCTGCTGGAGAACGCCGAGGAGCTGGCCCTGCTGGAAACCCT GGACATGGGCAAGCCGATCAGCGACTCGCTGCACATCGACGTCGCCAGCGCCGCCAACAGCCTGCGCTGGAGCGCCGAGG CGATCGACAAGATCTATGACGAAGTCGCCGCCACTCCCCATGCCGAGCTGGGCCTGGTGACCCGCGAGCCGGTCGGCGTG GTCGCCGCCATCGTGCCGTGGAACTTCCCGCTGCTGATGTCCTGCTGGAAACTCGGTCCGGCCCTGGCCACCGGCAACTC GGTGATCCTCAAGCCCTCCGAGAAGTCGCCGCTGACCGCCATCCGCATCGCCCAGCTGGCCGTCGAGGCCGGCATTCCGA AAGGCGTGTTCAACGTGCTGCCGGGCTATGGCCACACGGTAGGCAAGGCGCTGGCATTGCACATGGATGTCGACACCCTG GTGTTCACCGGTTCGACCAAGATCGCCAAGCAACTGATGGTCTATGCCGGCGAGTCGAACATGAAGCGCGTCTGGCTGGA GGCCGGCGGCAAGAGCCCGAACATCGTCTTCGCCGACGCCCCGGACCTGAAGGCCGCCGCCGAAGCCGCTGCCGGCGCCA TCGCCTTCAACCAGGGCGAAGTCTGCACCGCCGGTTCGCGCCTGCTGGTGGAGCGCTCCATCAAGGACAAGTTCCTGCCC CTGGTGATCGAGGCCCTCAAGGGCTGGAAACCGGGCAACCCGCTGGATCCGGAAACCAACGTCGGCGCGCTGGTGGACAC CCAGCAGATGAACACCGTGCTGTCCTACATCGAGGCCGGTCACAACGACGGCGCCAAGCTGGTCGCCGGCGGCAAGCGGA CCCTGGAAGAAACTGGTGGCACCTACGTCGAGCCGACTATCTTCGACGGCGTGACCAATGCGATGAAGATCGCCCGCGAG GAAATCTTCGGCCCGGTGCTCTCGGTGATCGAGTTCGAGGATGCCGAGGAAGCCGTGCGCATCGCCAACGACACGCCCTA TGGGCTGGCGGCGGCGGTCTGGACCAGCAACCTGTCCAAGGCGCACCTGACTGCCAAGGCCCTGCGCGCCGGCAGCGTCT GGGTCAACCAGTACGACGGCGGCGACATGACCGCTCCGTTCGGCGGCTTCAAGCAGTCGGGCAACGGTCGCGACAAGTCG CTGCACGCCTTCGACAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTCTGA Protein sequence : MTTLTRADWEARAKDLKIEGRAFVNGEYSNAASGETFDCLSPVDGRFLAKVASCDLADAEQAVKVARNAFDSGAWSRLAP AKRKQTMIRFADLLLENAEELALLETLDMGKPISDSLHIDVASAANSLRWSAEAIDKIYDEVAATPHAELGLVTREPVGV VAAIVPWNFPLLMSCWKLGPALATGNSVILKPSEKSPLTAIRIAQLAVEAGIPKGVFNVLPGYGHTVGKALALHMDVDTL VFTGSTKIAKQLMVYAGESNMKRVWLEAGGKSPNIVFADAPDLKAAAEAAAGAIAFNQGEVCTAGSRLLVERSIKDKFLP LVIEALKGWKPGNPLDPETNVGALVDTQQMNTVLSYIEAGHNDGAKLVAGGKRTLEETGGTYVEPTIFDGVTNAMKIARE EIFGPVLSVIEFEDAEEAVRIANDTPYGLAAAVWTSNLSKAHLTAKALRAGSVWVNQYDGGDMTAPFGGFKQSGNGRDKS LHAFDKYTELKATWIKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 2e-124 | 59 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-71 | 41 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-72 | 41 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-72 | 41 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-72 | 41 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-71 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PA5312 | NP_253999.1 | aldehyde dehydrogenase | VFG0082 | Protein | 9e-72 | 41 |
