Gene Information

Name : hcpB (PA5267)
Accession : NP_253954.1
Strain : Pseudomonas aeruginosa PAO1
Genome accession: NC_002516
Putative virulence/resistance : Unknown
Product : secreted protein Hcp
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 5932877 - 5933395 bp
Length : 519 bp
Strand : -
Note : Product name confidence: class 2 (High similarity to functionally studied protein)

DNA sequence :
ATGGCAACCCCCGCCTATATGTCCATCACCGGCACCAAGCAGGGCCTGATCACCGCCGGCGCCTTCACCGAGGATTCGGT
CGGCAACACCTACCAGGAAGGCCACGAGGACCAGGTGATGGTCCAGGGCTTCAACCACGAAGTGATCATCCCGCGCGACC
CGCAGTCCGGCCAGCCGACCGGCCAGCGCGTGCACAAGCCGGTGGTCATCACCAAGGTCTTCGACAAGGCCTCGCCCCTG
CTGCTGGCCGCCCTGACCTCCGGCGAGCGCCTGACCAAGGTGGAGATCCAGTGGTACCGCACCTCCGCCGCCGGCACCCA
GGAGCACTACTACACCACCGTCCTGGAAGACGCGATCATCGTCGACATCAAGGACTACATGCACAACTGCCAGGACCCGG
GCAACGCCCACTTCACCCACCTGGAAGACGTGCACTTCACCTACCGCAAGATCACCTGGACCCACGAAGTCTCCGGCACC
TCCGGCTCCGACGACTGGCGCTCCCCGGTCGCCGGCTGA

Protein sequence :
MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASPL
LLAALTSGERLTKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGT
SGSDDWRSPVAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec16 YP_851428.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-48 60
aec16 AAQ96710.1 Aec16 Not tested AGI-1 Protein 3e-48 60
HH0243 NP_859774.1 hypothetical protein Not tested HHGI1 Protein 7e-44 58