Gene Information

Name : algR (PA5261)
Accession : NP_253948.1
Strain : Pseudomonas aeruginosa PAO1
Genome accession: NC_002516
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulatory protein AlgR
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 5922544 - 5923290 bp
Length : 747 bp
Strand : -
Note : Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

DNA sequence : 
ATGAATGTCCTGATTGTCGATGACGAACCTCTGGCGCGAGAGCGCCTGGCCCGATTGGTAGGGCAACTGGACGGCTATCG
CGTCCTCGAGCCCTCGGCCAGCAATGGCGAAGAAGCGCTGACGCTGATCGACAGCCTCAAGCCCGATATCGTCCTGCTGG
ATATCCGCATGCCCGGTCTGGACGGCCTCCAGGTCGCGGCCAGACTCTGCGAGCGGGAAGCGCCGCCGGCTGTGATCTTC
TGCACGGCCCATGACGAATTCGCCCTGGAAGCCTTCCAGGTCAGCGCCGTGGGCTACCTGGTCAAGCCGGTGCGCAGCGA
AGACCTGGCCGAGGCGTTGAAGAAAGCCTCGCGACCGAACCGCGTGCAACTGGCCGCGCTGACCAAGCCCCCGGCCTCCG
GCGGCAGCGGTCCGCGCAGCCACATCAGTGCACGGACCCGCAAGGGGATCGAGCTGATCCCGCTGGAAGAGGTGATCTTC
TTCATTGCCGACCACAAGTACGTGACCTTGCGCCATGCGCAGGGCGAGGTGCTGCTGGACGAGCCGTTGAAGGCGCTGGA
AGACGAGTTCGGCGAGCGCTTCGTGCGCATCCACCGCAACGCGCTGGTCGCCCGCGAACGGATCGAACGCCTGCAGCGTA
CGCCGCTGGGGCATTTCCAGCTCTACCTGAAAGGCCTCGACGGCGATGCGCTGACCGTCAGCCGGCGGCACGTGGCCGGA
GTCAGGCGTCTGATGCATCAGCTCTGA

Protein sequence : 
MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGLDGLQVAARLCEREAPPAVIF
CTAHDEFALEAFQVSAVGYLVKPVRSEDLAEALKKASRPNRVQLAALTKPPASGGSGPRSHISARTRKGIELIPLEEVIF
FIADHKYVTLRHAQGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLYLKGLDGDALTVSRRHVAG
VRRLMHQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 2e-52 46
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 2e-52 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
algR NP_253948.1 alginate biosynthesis regulatory protein AlgR VFG0119 Protein 1e-114 100