|
Name : PA5021 (PA5021) Accession : NP_253708.3 Strain : Pseudomonas aeruginosa PAO1 Genome accession: NC_002516 Putative virulence/resistance : Unknown Product : sodium/hydrogen antiporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG3263 EC number : - Position : 5647814 - 5649430 bp Length : 1617 bp Strand : + Note : Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene) DNA sequence : ATGATCGCCGGCAACGACGGGGTCGGCGGCATCGTCTTCGACAACTATCCGATGGCCTACCTGGTGGGCAACCTGGCGCT CGCCGTGATCCTCCTCGACGGCGGCCTGCGCACCCGCGTCTCCAGCTTCCGCGTGGCGCTCTGGCCGGCATTGTCGCTGG CCACCCTGGGCGTGCTGGTGACCACCGGCCTGACCGGCATCGCGGCAGCCTGGCTGTTCGACCTGCACTGGATGGAAGGC CTGCTGATCGGCGCCATCGTCGGCTCCACCGACGCCGCCGCGGTGTTCTCCCTGCTCGGCGGCAAAGGTCTCAACGAGCG GGTCACCGCGACCCTGGAAATCGAATCGGGCAGCAACGACCCGATGGCGGTGTTCCTCACCGTGACCCTGATCGAGATGC TCGCCAGCGGCCAGACCGGCCTCAGCTGGGGCTTCGCCCTGCACCTGGTGCAGCAGTTCGGTCTCGGCGCCCTGCTCGGT CTTGGCGGCGGCTGGTTGCTGCTGCAACTGATCAACCGCATGCACCTGGCCGGCGGCCTCTACCCGTTGCTGGTGATCAG CGGTGGCCTGCTGGTGTTCGCCCTGGCCAACGCCGTCGGCGGCAGCGGCATCCTCGCCATCTACCTGTGCGGCCTGCTCC TCGGCAACCGCCCGATCCGCAGCCGCCACGGCATCCTGCACATGCTCGACGGCATGGCCTGGCTGGCGCAGATCGGCATG TTCCTGGTCCTCGGCCTGCTGGTCACACCCCACGACCTGTGGCCGATCGCCCTGCCGGCACTGGCCCTGGCGCTGTGGAT GATCCTGGTGGCACGACCGCTGTCGGTACTGATCGGACTGATCCCGTTCCGCGCCTTCCACGACCGCGAGAAAGCCTTCA TCGCCTGGGTCGGCCTGCGCGGCGCGGTGCCGATCATCCTCGCGGTGTTCCCGCTGATGGCCGGCCTGCCGAACGCCCAG CTGTTCTTCAACGTGGCCTTCTTCATCGTCCTGGTCTCACTGCTGGTGCAGGGCACCAGCCTGCCCTGGGCGGCCAGGCT GCTGCGGGTGGTGGTGCCGCCGGACCCGGCACCGATATCCCGCGCCGGCCTGGAGATCCACCCGACCAGCGAGTGGGAGC TGTTCGTCTACCACCTGAACAAGGAAAAGTGGTGCATCGGCGCCGCCCTGCGCGAGCTGAAGATGCCCGGCGGGACCCGG ATCGCCGCGCTGTTCCGCGGCACCGAACTGCTCCACCCGTCGGGCAGCACCATCCTCGAGGCCGACGACATTCTCTGCGT GATCGGCCACGAACACGACCTGCCGGCCCTCGGCAAGCTGTTCAGCCAGGCGCCCGACCGGGGCCTCGGCGCGCGCTTCT TCGGCGACTTCGTGCTGGAAGGCGATGCCCAGCTGTCGGCGGTGGCCTCGCTCTACGGCCTGAAGCTCGACGGCATCGAC GGCGAGCAAGCGCTGGGCCGCTTCATCGCCCACGAGATCGGCGGCGAAGCGGTGATCGGCGACCAGGTGGAGTGGAACGG CCTGACCTGGACCGTGGCCGCCCTGGAAGGCAACCGTATCCGCAAGGTCGGCGTGAAGTTTCCGGAAGGCCGCCCAGGGC CCGGACTTTTCCTCTGA Protein sequence : MIAGNDGVGGIVFDNYPMAYLVGNLALAVILLDGGLRTRVSSFRVALWPALSLATLGVLVTTGLTGIAAAWLFDLHWMEG LLIGAIVGSTDAAAVFSLLGGKGLNERVTATLEIESGSNDPMAVFLTVTLIEMLASGQTGLSWGFALHLVQQFGLGALLG LGGGWLLLQLINRMHLAGGLYPLLVISGGLLVFALANAVGGSGILAIYLCGLLLGNRPIRSRHGILHMLDGMAWLAQIGM FLVLGLLVTPHDLWPIALPALALALWMILVARPLSVLIGLIPFRAFHDREKAFIAWVGLRGAVPIILAVFPLMAGLPNAQ LFFNVAFFIVLVSLLVQGTSLPWAARLLRVVVPPDPAPISRAGLEIHPTSEWELFVYHLNKEKWCIGAALRELKMPGGTR IAALFRGTELLHPSGSTILEADDILCVIGHEHDLPALGKLFSQAPDRGLGARFFGDFVLEGDAQLSAVASLYGLKLDGID GEQALGRFIAHEIGGEAVIGDQVEWNGLTWTVAALEGNRIRKVGVKFPEGRPGPGLFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAB61290.1 | unknown | Not tested | PAI I CFT073 | Protein | 3e-145 | 67 |
| f536 | AAC61706.1 | F536 | Not tested | PAI I CFT073 | Protein | 3e-145 | 67 |
