Gene Information

Name : hpcD (PA4125)
Accession : NP_252814.1
Strain : Pseudomonas aeruginosa PAO1
Genome accession: NC_002516
Putative virulence/resistance : Unknown
Product : 5-carboxymethyl-2-hydroxymuconate isomerase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3232
EC number : -
Position : 4613539 - 4613931 bp
Length : 393 bp
Strand : +
Note : Product name confidence: class 2 (High similarity to functionally studied protein)

DNA sequence :
ATGCCGCACTTCATCGCCGAATACACCGACAACATCGAAGCCGAAGCCGACCTGCCCGGCCTGTTCGAGAAGGTCCACGC
CTGCCTCGGCGCCAGCGGCGTTTTCCCGCTCGGCGGCATCCGCAGCCGCGGCGTGCGCCTGGACACCTGGCGCATGGCCG
ACGGCAGGCACGACTACGCCTTCGTCCACATGACCCTGAAAGTCGGCGCCGGTCGCGACCTGGAGACTCGCCGGCAAGTC
GCCGAGGCACTTTTCGAGGTGATCACCGCGCACTTCGCCGAGCTCCAGGCGCGACGCCTGCTGGCGCTGTCCTTCGAACT
CACCGAACTGGACGCGGAGCTGAACTACAAGCGCAACAACGTGCATGAATTCCTGAACAACCCGGCGGACTGA

Protein sequence :
MPHFIAEYTDNIEAEADLPGLFEKVHACLGASGVFPLGGIRSRGVRLDTWRMADGRHDYAFVHMTLKVGAGRDLETRRQV
AEALFEVITAHFAELQARRLLALSFELTELDAELNYKRNNVHEFLNNPAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaF AAO17181.1 HpaF Not tested tcd island Protein 2e-38 63