Gene Information

Name : xerD (PA3738)
Accession : NP_252427.1
Strain : Pseudomonas aeruginosa PAO1
Genome accession: NC_002516
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 4190616 - 4191512 bp
Length : 897 bp
Strand : -
Note : Product name confidence: class 2 (High similarity to functionally studied protein)

DNA sequence : 
ATGAGTACCCTCGAACATCCCCTGATCGACCGTTTCCTCGATGCCCTGTGGCTGGAAAAAGGCCTTGCCGACAACACCCG
CGAGGCTTATCGCAACGACCTCCAGCAGTTCAACGCCTGGCTCGATGGCCGCGGGCTGCGCCTGGAGGGCATCGGCCGCG
ACGCCATCCTCGATCACCTGGCCTGGCGCCTGGAACAGGGCTACAAGGCCCGCTCGACCGCGCGCTTCCTCTCCGGCCTG
CGTGGCTTCTATCGCTATTGCCTGCGCGACGGCCTGATCGCCGAGGATCCCACCTTGCAGGTGGACCTGCCGCAACTGGG
CAAGCCGTTGCCGAAATCCCTCTCCGAAGCGGACGTCGAGGCATTGCTGGCGGCGCCGGAAGTCGACGACCCGCTGGGCC
TGCGCGATCGCACCATGCTCGAAGTGCTGTATGCCTGCGGCCTGCGGGTCAGCGAACTGGTCGGCCTGACCCTGGAGCAG
GTCAACCTGCGCCAGGGCGTGGTCAAGGTGTTCGGCAAGGGCAGCAAGGAGCGCCTGGTGCCGCTCGGCGAGGAAGCCAT
CGGCTGGCTCGAACGCTACCTGCGCGAGGCCCGCGGCGACCTGCTCGGCGGGCGGCCCAGCGACGTGCTGTTCCCCAGCC
TGCGCGGCGAACAGATGACCCGCCAGACCTTCTGGCATCGCATCAAGCATCACGCGCAGGTGGCGGCGATCGGCACGTCG
ATTTCGCCGCACACCCTGCGCCACGCCTTCGCCACCCACCTGCTCAACCATGGCGCCGACCTGCGGGTGGTGCAGATGCT
GCTCGGCCACAGCGACCTGTCGACCACCCAGATCTATACCCATATCGCCCGGGCCCGCCTCCAGGATCTGCACGCACGCC
ACCACCCGCGAGGCTGA

Protein sequence : 
MSTLEHPLIDRFLDALWLEKGLADNTREAYRNDLQQFNAWLDGRGLRLEGIGRDAILDHLAWRLEQGYKARSTARFLSGL
RGFYRYCLRDGLIAEDPTLQVDLPQLGKPLPKSLSEADVEALLAAPEVDDPLGLRDRTMLEVLYACGLRVSELVGLTLEQ
VNLRQGVVKVFGKGSKERLVPLGEEAIGWLERYLREARGDLLGGRPSDVLFPSLRGEQMTRQTFWHRIKHHAQVAAIGTS
ISPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHIARARLQDLHARHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-65 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-65 54