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Name : wbpM (PA3141) Accession : NP_251831.1 Strain : Pseudomonas aeruginosa PAO1 Genome accession: NC_002516 Putative virulence/resistance : Virulence Product : nucleotide sugar epimerase/dehydratase WbpM Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3524681 - 3526678 bp Length : 1998 bp Strand : - Note : Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa) DNA sequence : ATGTTGGATAATTTGAGGATAAAGCTCCTGGGATTGCCGCGCCGCTATAAGCGAATGCTGCAAGTCGCTGCCGATGTGAC TCTTGTGTGGCTATCCCTCTGGCTGGCTTTCTTGGTCAGGTTGGGCACAGAAGACATGATCAGCCCGTTTAGCGGCCATG CCTGGCTGTTCATCGCCGCCCCGTTGGTGGCCATTCCCCTGTTCATCCGCTTCGGCATGTACCGGGCGGTGATGCGCTAC CTGGGCAACGACGCCCTTATCGCGATCGCCAAGGCCGTCACCATTTCCGCGCTGGTCCTGTCGTTGCTGGTCTACTGGTA CCGCTCCCCGCCGGCGGTGGTGCCGCGTTCCCTGGTGTTCAACTACTGGTGGTTGAGCATGCTGCTGATCGGCGGCTTGC GTCTGGCCATGCGCCAGTATTTCATGGGAGACTGGTACTCTGCTGTGCAGTCGGTACCATTTCTCAACCGCCAGGATGGC CTGCCCAGGGTGGCTATCTATGGCGCGGGGGCGGCCGGCAACCAGTTGGTTGCGGCATTGCGTCTCGGTCGGGCGATGCG TCCGGTGGCGTTCATCGATGATGACAAGCAGATCGCCAACCGGGTCATCGCCGGTCTGCGGGTCTATACCGCCAAGCATA TCCGCCAGATGATCGACGAGACGGGCGCGCAGGAGGTTCTCCTGGCGATTCCTTCCGCCACTCGGGCCCGGCGCCGAGAG ATTCTCGAGTCCCTGGAGCCGTTCCCGCTGCACGTGCGCAGCATGCCCGGCTTCATGGACCTGGCCAGCGGCCGGGTCAA GGTGGACGACCTGCAGGAGGTGGACATCGCTGACCTGCTGGGGCGCGACAGCGTCGCACCGCGCAAGGAGCTGCTGGAAC GGTGCATCCGCGGTCAGGTGGTGATGGTGACCGGGGCGGGCGGCTCTATCGGTTCGGAACTCTGTCGGCAGATCATGAGT TGTTCGCCTAGCGTGCTGATCCTGTTCGAGCACAGCGAATACAACCTCTATAGCATCCATCAGGAACTGGAGCGTCGGAT CAAGCGCGAGTCGCTTTCGGTGAACCTGTTGCCGATCCTCGGTTCGGTGCGCAATCCCGAGCGCCTGGTGGACGTGATGC GTACCTGGAAGGTCAATACCGTCTACCATGCGGCGGCCTACAAGCATGTGCCGATCGTCGAGCACAACATCGCCGAGGGC GTTCTCAACAACGTGATAGGCACCTTGCATGCGGTGCAGGCCGCGGTGCAGGTCGGCGTGCAGAACTTCGTGCTGATTTC CACCGACAAGGCGGTGCGACCGACCAATGTGATGGGCAGCACCAAGCGCCTGGCGGAGATGGTCCTTCAGGCGCTCAGCA ACGAATCGGCACCGGTGCTGTTCGGCGATCGGAAGGACGTGCATCACGTCAACAAGACCCGTTTCACCATGGTCCGCTTC GGCAACGTCCTCGGTTCGTCCGGTTCGGTCATTCCGCTGTTCCGCGAGCAGATCAAGCGCGGCGGCCCGGTGACGGTCAC CCACCCGAGCATCACCCGTTACTTCATGACCATTCCCGAGGCAGCGCAGTTGGTCATCCAGGCCGGTTCGATGGGGCAGG GCGGAGATGTATTCGTGCTGGACATGGGGCCGCCGGTGAAGATCCTGGAGCTCGCCGAGAAGATGATCCACCTGTCCGGC CTGAGCGTGCGTTCCGAGCGTTCGCCCCATGGTGACATCGCCATCGAGTTCAGTGGCCTGCGTCCTGGCGAGAAGCTCTA CGAAGAGCTGCTGATCGGTGACAACGTGAATCCCACCGACCATCCGATGATCATGCGGGCCAACGAGGAACACCTGAGCT GGGAGGCCTTCAAGGTCGTGCTGGAGCAGTTGCTGGCCGCCGTGGAGAAGGACGACTACTCGCGGGTTCGCCAGTTGCTG CGGGAAACCGTCAGCGGCTATGCGCCTGACGGTGAAATCGTCGACTGGATCTATCGCCAGAGGCGGCGAGAACCCTGA Protein sequence : MLDNLRIKLLGLPRRYKRMLQVAADVTLVWLSLWLAFLVRLGTEDMISPFSGHAWLFIAAPLVAIPLFIRFGMYRAVMRY LGNDALIAIAKAVTISALVLSLLVYWYRSPPAVVPRSLVFNYWWLSMLLIGGLRLAMRQYFMGDWYSAVQSVPFLNRQDG LPRVAIYGAGAAGNQLVAALRLGRAMRPVAFIDDDKQIANRVIAGLRVYTAKHIRQMIDETGAQEVLLAIPSATRARRRE ILESLEPFPLHVRSMPGFMDLASGRVKVDDLQEVDIADLLGRDSVAPRKELLERCIRGQVVMVTGAGGSIGSELCRQIMS CSPSVLILFEHSEYNLYSIHQELERRIKRESLSVNLLPILGSVRNPERLVDVMRTWKVNTVYHAAAYKHVPIVEHNIAEG VLNNVIGTLHAVQAAVQVGVQNFVLISTDKAVRPTNVMGSTKRLAEMVLQALSNESAPVLFGDRKDVHHVNKTRFTMVRF GNVLGSSGSVIPLFREQIKRGGPVTVTHPSITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGPPVKILELAEKMIHLSG LSVRSERSPHGDIAIEFSGLRPGEKLYEELLIGDNVNPTDHPMIMRANEEHLSWEAFKVVLEQLLAAVEKDDYSRVRQLL RETVSGYAPDGEIVDWIYRQRRREP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-85 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wbpM | NP_251831.1 | nucleotide sugar epimerase/dehydratase WbpM | VFG0029 | Protein | 1e-120 | 46 |
