Name : PA3128 (PA3128) Accession : NP_251818.1 Strain : Pseudomonas aeruginosa PAO1 Genome accession: NC_002516 Putative virulence/resistance : Unknown Product : short-chain dehydrogenase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1028 EC number : - Position : 3510144 - 3510890 bp Length : 747 bp Strand : + Note : Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene) DNA sequence : ATGCGCAACGTCATGCTGATCACCGGAGCCAGCCGCGGCATCGGCGCCGCCACCGCTCTGCTCGCCGCCGAACGCGGCTA TGCGGTCGTCCTCAACTATCTGCGCAACCGCGAGGCCGCCGAAGCGCTGCGCCAGCGCATCGAGCGCCAGGGCGGCGAAG CCCTGGCGGTGGCGGCCGACGTAGCCGAGGAAGGCGATGTCGAGCGGCTGTTCGCCTCCATCGACGAACGTTTCGGCCGC CTCGACGTGCTGGTCAACAACGCCGGCATGCTGGAAGCGCAGACGCGCCTGGAAAACATCGACGCGGCGCGCCTGCACAG GGTATTCGCGACCAACGTGACCGGCAGCTTCCTCTGCGCCCGCGAGGCGGTGAAGCGCCTGTCGACCCGCCACGGCGGGC GCGGCGGCAGCATCGTCAACGTGTCCTCGATGGCCTCGCGGCTGGGATCGCCCAACGAATACATCGACTATGCCGCCGCC AAGGGCGCCATCGACAGCATGACCATCGGTCTGGCCAGGGAAGTGGCGGCGGAGGGTATCCGGGTCAACGCGGTGCGGCC CGGACTGATCGATACCGAGATCCACGCCAGCGGCGGCGAGCCCGGCCGTATCGAACGCCTGAAGGGCGGCATACCGCTAG GACGCGGCGGTACGGCGGAGGAAGTCGCGCGGGCGATTCTCTGGCTGGCGTCGGACGAAGCCAGCTACAGCACCGGCACC TTCATCGATGTCAGCGGCGGCCGCTAG Protein sequence : MRNVMLITGASRGIGAATALLAAERGYAVVLNYLRNREAAEALRQRIERQGGEALAVAADVAEEGDVERLFASIDERFGR LDVLVNNAGMLEAQTRLENIDAARLHRVFATNVTGSFLCAREAVKRLSTRHGGRGGSIVNVSSMASRLGSPNEYIDYAAA KGAIDSMTIGLAREVAAEGIRVNAVRPGLIDTEIHASGGEPGRIERLKGGIPLGRGGTAEEVARAILWLASDEASYSTGT FIDVSGGR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
VSAL_I1482 | YP_002262921.1 | glucose 1-dehydrogenase | Not tested | Not named | Protein | 1e-61 | 62 |
orf29 | AAO17195.1 | Orf29 | Not tested | tcd island | Protein | 2e-60 | 61 |